Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 DDX18P4-201ENST00000511690 1966 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 MTCO1P12-201ENST00000414273 1543 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RNU6-1097P-201ENST00000363586 107 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RN7SKP124-201ENST00000364730 341 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RN7SKP6-201ENST00000364795 319 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 HMGB1P17-201ENST00000403495 628 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RNU2-9P-201ENST00000410194 145 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RNU6-1148P-201ENST00000410992 104 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RPL35AP24-201ENST00000413846 330 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 CHEK2P3-201ENST00000416118 248 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC234782.4-201ENST00000417646 1048 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AL133173.1-201ENST00000423458 397 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 NPM1P18-201ENST00000434232 732 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AL356276.2-201ENST00000435919 558 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC012512.1-201ENST00000446594 718 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC090142.1-201ENST00000465776 462 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC078785.3-201ENST00000476607 425 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 EIF4EP3-201ENST00000498782 656 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RNU6-559P-201ENST00000516151 98 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RNU6-264P-201ENST00000517134 104 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 Y_RNA.720-201ENST00000517166 92 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 OR4R1P-201ENST00000529879 463 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC026464.5-201ENST00000562497 722 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 MRPS21P7-201ENST00000566937 238 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 MIR1273E-201ENST00000581165 102 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 MIR3149-201ENST00000584629 83 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC025857.2-201ENST00000602711 238 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC121334.2-201ENST00000605387 271 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC019193.3-201ENST00000609144 554 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 BX323046.1-201ENST00000610145 535 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC109309.2-201ENST00000612597 332 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 AC091925.1-201ENST00000623204 462 ntBASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP3Q9BWW4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RNU5E-1-201ENST00000362477 120 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RNU6-108P-201ENST00000365558 107 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RNU4-2-201ENST00000365668 141 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 SNORA22B-201ENST00000383876 138 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RNU6-657P-201ENST00000383904 107 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RNU6-730P-201ENST00000383954 104 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RNA5SP91-201ENST00000390902 119 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RN7SKP229-201ENST00000410465 302 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 Y_RNA.605-201ENST00000410577 105 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AL451054.2-201ENST00000420896 202 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 UQCRBP1-201ENST00000421129 336 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RGS17P1-201ENST00000423358 553 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AL353777.1-201ENST00000425552 326 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 DUTP6-201ENST00000425573 462 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC007547.1-201ENST00000462177 490 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RPL23AP71-201ENST00000470966 469 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms