Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDK5RAP2Q96SN8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDK5RAP2Q96SN8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDK5RAP2Q96SN8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CDK5RAP2Q96SN8 OR5H2-201ENST00000355273 945 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 MIR422A-201ENST00000362286 90 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-7-201ENST00000364784 107 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-8-201ENST00000365467 107 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 AC007899.1-201ENST00000412776 775 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RPL32P35-201ENST00000415214 394 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 AC016696.1-201ENST00000446949 318 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RN7SL429P-201ENST00000479090 223 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RN7SL489P-201ENST00000486185 223 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RN7SL327P-201ENST00000488659 223 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 NIPA2P2-201ENST00000496376 1083 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 HMGB1P3-201ENST00000502802 616 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RN7SL853P-201ENST00000617250 223 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 MTND5P24-201ENST00000438892 1767 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 OR5BR1P-201ENST00000524992 1330 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 OR1S2-201ENST00000302592 978 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 SNORD56.3-201ENST00000363507 71 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 PRDX3P4-201ENST00000470828 747 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 KC877373.1-201ENST00000479066 408 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RPS3AP43-201ENST00000479743 781 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 RN7SL20P-201ENST00000488827 297 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 SNORA31.21-201ENST00000517180 77 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 AC022509.4-201ENST00000621404 572 ntBASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP2Q96SN8 AC134882.1-201ENST00000603738 1676 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 SNORD15B-201ENST00000384714 146 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-1320P-201ENST00000390838 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-1269P-201ENST00000391139 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 RNA5SP184-201ENST00000411071 108 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-599P-201ENST00000459383 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-1193P-201ENST00000459461 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AC010468.1-201ENST00000461022 817 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AC027309.2-201ENST00000520566 192 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AC104027.1-201ENST00000521887 300 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-368P-201ENST00000620928 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-538P-201ENST00000622329 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 AL356490.1-201ENST00000623079 479 ntBASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP2Q96SN8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-301P-201ENST00000384277 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 RNA5SP80-201ENST00000410475 111 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 SNRPFP2-201ENST00000440710 251 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AC022080.3-201ENST00000544433 482 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AC135001.1-201ENST00000544546 283 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AGGF1P8-201ENST00000562979 1000 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 MIR7106-201ENST00000612419 65 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AC091903.1-201ENST00000624322 454 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 RNU6-1263P-201ENST00000384601 106 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AP000936.3-201ENST00000438127 255 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AC108734.1-201ENST00000439549 399 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 MTND4LP12-201ENST00000448237 295 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 OR5G4P-201ENST00000525251 760 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AL365503.1-201ENST00000605247 905 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AC107294.1-201ENST00000609524 467 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 AL713922.2-201ENST00000619384 716 ntBASIC3.56□□□□□ -1.84
CDK5RAP2Q96SN8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms