Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RPL30P9-201ENST00000465586 330 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC109486.1-201ENST00000486833 374 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 MTND4LP31-201ENST00000514859 294 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 RNU6-488P-201ENST00000515918 99 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC012339.2-201ENST00000523996 453 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 GTF2IP22-201ENST00000554443 182 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC006362.1-201ENST00000567392 174 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 KPNA2P3-201ENST00000584190 848 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC106028.5-201ENST00000610332 395 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AL121873.1-201ENST00000616013 524 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 RN7SL722P-201ENST00000617780 284 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 RN7SL565P-201ENST00000618246 284 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC012414.7-202ENST00000622705 1090 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC005086.4-201ENST00000623065 213 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AL356121.2-201ENST00000624715 780 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC092184.1-201ENST00000625042 715 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 MIR6715B-201ENST00000637172 77 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 MTCO1P14-201ENST00000441695 1559 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AL139811.1-201ENST00000424779 2299 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AL356489.2-201ENST00000566968 3528 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 RPL21P132-201ENST00000331267 462 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 RNU1-83P-201ENST00000363426 164 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC007066.1-201ENST00000392902 381 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 RNA5SP104-201ENST00000410989 118 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 BX510359.2-201ENST00000417920 305 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC008280.1-201ENST00000418851 412 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 RPL36P19-201ENST00000430744 301 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 BX323845.1-201ENST00000432417 179 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 KCTD10P1-201ENST00000434203 625 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC096638.2-201ENST00000434965 711 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 RHOT1P3-201ENST00000436571 331 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 MTND2P20-201ENST00000440805 661 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 EPS15P1-201ENST00000448836 336 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 TPT1P13-201ENST00000449760 499 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 RPL36AP33-201ENST00000450395 310 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 TRGVB-201ENST00000453257 471 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 RPS5P7-201ENST00000456664 608 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC025445.1-201ENST00000502728 300 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 PRELID3BP7-201ENST00000503606 469 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 RNA5SP154-201ENST00000516193 111 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 RN7SKP96-201ENST00000516948 297 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC022790.1-201ENST00000522872 204 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 DEFB109D-201ENST00000529497 240 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 OR5AN2P-201ENST00000534535 896 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC011477.5-201ENST00000586571 259 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC020910.3-201ENST00000603701 874 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC104687.2-201ENST00000604442 342 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AP000254.1-201ENST00000609934 520 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 RMST_9.1-201ENST00000619945 193 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC079228.1-201ENST00000624774 1049 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC127502.3-201ENST00000636170 1206 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC025125.1-201ENST00000624743 1922 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.61□□□□□ -1.67
VPS50Q96JG6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VPS50Q96JG6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS50Q96JG6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms