Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RAB40AQ8WXH6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
RAB40AQ8WXH6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RAB40AQ8WXH6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RAB40AQ8WXH6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.15□□□□□ -1.74
RAB40AQ8WXH6 AC017104.4-201ENST00000636283 1592 ntBASIC4.15□□□□□ -1.74
RAB40AQ8WXH6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RAB40AQ8WXH6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
RAB40AQ8WXH6 ELL2P3-201ENST00000457883 1602 ntBASIC4.15□□□□□ -1.74
RAB40AQ8WXH6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RN7SKP149-201ENST00000363008 344 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RNU6-660P-201ENST00000364566 109 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 SNORD116-1-201ENST00000384335 95 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RNU6-878P-201ENST00000384578 110 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 MT-TC-201ENST00000387405 66 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AL031679.1-201ENST00000400616 525 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 FNDC3CP-201ENST00000420795 1155 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC012065.2-201ENST00000421295 375 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 Z74021.1-201ENST00000423610 407 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC104837.2-201ENST00000427236 424 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 CKS1BP5-201ENST00000434172 273 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC093414.1-201ENST00000434712 514 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RHOT1P3-201ENST00000436571 331 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RPL23AP33-201ENST00000442301 452 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 MTND2P4-201ENST00000445034 1004 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 VN1R32P-201ENST00000452234 905 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RPS27AP8-201ENST00000452665 445 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RPL35AP28-201ENST00000459730 331 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RPS26P28-201ENST00000470806 348 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RPS6P4-201ENST00000494693 758 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 OR5H5P-201ENST00000503164 928 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 MTCO3P44-201ENST00000510977 541 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC087276.1-201ENST00000529659 480 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC136618.2-201ENST00000575091 400 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 RPL7P50-201ENST00000600588 727 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AC073091.2-201ENST00000603205 907 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 NMD3P1-201ENST00000439704 1488 ntBASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RAB40AQ8WXH6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AL022578.1-201ENST00000439330 1433 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AC103591.2-201ENST00000265259 766 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 RNU6-433P-201ENST00000363216 104 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 RNU6-339P-201ENST00000384310 107 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 TPMTP2-201ENST00000414372 726 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 HSFY4P-201ENST00000415994 1181 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 RPS12P23-201ENST00000419579 400 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AC069213.2-201ENST00000420238 366 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AL592293.2-201ENST00000422292 996 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AC005517.2-201ENST00000424673 553 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AL117351.1-201ENST00000438864 766 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AC112498.1-201ENST00000444401 332 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AL590399.6-201ENST00000446396 307 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AC092754.2-201ENST00000463506 460 ntBASIC4.14□□□□□ -1.75
RAB40AQ8WXH6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms