Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL663061.1-201ENST00000416625 580 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 PPIAP20-201ENST00000449839 135 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 RN7SL413P-201ENST00000482700 297 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 RN7SL214P-201ENST00000487317 265 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 UBA52P3-201ENST00000491303 382 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 RPS27P20-201ENST00000492051 246 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC093664.1-201ENST00000511779 289 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AP002001.1-203ENST00000534002 267 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC026826.3-201ENST00000561747 158 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC090617.3-201ENST00000573670 475 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC022400.9-201ENST00000623633 273 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AP003486.1-201ENST00000525716 3994 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.15□□□□□ -1.27
VARS2Q5ST30 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.15□□□□□ -1.27
VARS2Q5ST30 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.15□□□□□ -1.27
VARS2Q5ST30 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
VARS2Q5ST30 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
VARS2Q5ST30 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
VARS2Q5ST30 ZNF101P1-201ENST00000435701 1720 ntBASIC7.15□□□□□ -1.27
VARS2Q5ST30 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
VARS2Q5ST30 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VARS2Q5ST30 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
VARS2Q5ST30 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
VARS2Q5ST30 AP004289.1-201ENST00000436307 2205 ntBASIC7.15□□□□□ -1.27
VARS2Q5ST30 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
VARS2Q5ST30 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 MAPK10-357ENST00000641831 2858 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 RNU6-151P-201ENST00000364158 107 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 RNU6-188P-201ENST00000364207 107 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 U3.52-201ENST00000384034 216 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 RNU6-434P-201ENST00000384376 107 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 MIR199B-201ENST00000384849 110 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 MIR1204-201ENST00000408388 67 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 RN7SKP271-201ENST00000410528 320 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AC239367.3-201ENST00000428996 814 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AC026826.1-201ENST00000493002 361 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AC093870.1-201ENST00000506837 213 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 RNU6-202P-201ENST00000515998 96 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 Y_RNA.686-201ENST00000516548 134 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 RANP3-201ENST00000530970 276 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 Z97989.1-201ENST00000531702 2421 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AP003115.1-201ENST00000569849 463 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 SNORD96A-201ENST00000606577 79 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 MIR7854-201ENST00000620068 65 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AL138713.1-201ENST00000624026 2130 ntBASIC7.14□□□□□ -1.27
VARS2Q5ST30 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.14□□□□□ -1.27
VARS2Q5ST30 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARS2Q5ST30 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 IRF5P1-201ENST00000504852 2164 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC007785.2-201ENST00000598627 1916 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms