Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 RNVU1-3-201ENST00000364313 161 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 Y_RNA.436-201ENST00000384097 102 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 RNU2-42P-201ENST00000410697 113 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC092634.6-201ENST00000418558 192 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 MRPS36P1-201ENST00000421291 307 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 RPL7P44-201ENST00000424827 742 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 SKP1P3-201ENST00000429280 487 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AL359265.2-201ENST00000434367 631 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC241584.1-201ENST00000438469 1241 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 ISCA1P2-201ENST00000438679 421 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC021146.3-201ENST00000511911 260 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 Y_RNA.655-201ENST00000515919 96 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 OR5BC1P-201ENST00000529327 739 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC084824.1-201ENST00000550917 1005 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 MIR4715-201ENST00000584117 79 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 MIR4999-201ENST00000585029 91 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC091979.2-201ENST00000607514 214 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC122133.1-201ENST00000613964 233 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 U73479.1-201ENST00000618062 168 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC073530.2-201ENST00000623987 261 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 AC026634.1-201ENST00000634369 198 ntBASIC5.18□□□□□ -1.58
LONRF3Q496Y0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LONRF3Q496Y0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC012020.1-201ENST00000624541 1728 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC090337.1-201ENST00000579651 2074 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 IL6STP1-201ENST00000346911 1020 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 RNA5SP502-201ENST00000362694 119 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 RNU6-553P-201ENST00000364047 96 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 RNU6-374P-201ENST00000364146 108 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 TAF9BP1-201ENST00000396646 746 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 EIF5P1-201ENST00000400019 1231 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 RNU2-28P-201ENST00000410457 189 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 VDAC1P9-201ENST00000412766 841 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC004690.1-201ENST00000418216 328 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 RPEP3-201ENST00000425462 676 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AL356276.2-201ENST00000435919 558 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 MTCYBP3-201ENST00000445588 1137 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AL606662.1-201ENST00000445763 553 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 MTCO2P7-201ENST00000446518 666 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 RPS20P32-201ENST00000456044 356 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 SCARNA10-201ENST00000459255 330 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC092754.2-201ENST00000463506 460 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 SYPL1P1-201ENST00000473622 768 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 RPL7P18-201ENST00000478965 734 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC013356.1-201ENST00000489027 564 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC026979.1-201ENST00000492525 396 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 TMEM248P1-201ENST00000510579 951 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC105185.1-201ENST00000518705 535 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC087808.1-201ENST00000520501 361 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 OR4A45P-201ENST00000529954 901 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC005832.3-201ENST00000537929 631 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 MIR4277-201ENST00000578298 84 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 RPL7P50-201ENST00000600588 727 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 VN1R82P-201ENST00000601481 356 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms