Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC110792.2-201ENST00000510278 224 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AC005921.1-201ENST00000510589 286 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AC108064.1-201ENST00000513791 460 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.32□□□□□ -1.88
RFX4Q33E94 MTCO1P35-201ENST00000515270 228 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 RN7SKP234-201ENST00000517173 224 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.32□□□□□ -1.88
RFX4Q33E94 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.32□□□□□ -1.88
RFX4Q33E94 CYCSP30-201ENST00000546447 172 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.32□□□□□ -1.88
RFX4Q33E94 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.32□□□□□ -1.88
RFX4Q33E94 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.32□□□□□ -1.88
RFX4Q33E94 AC008507.1-201ENST00000587506 734 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.32□□□□□ -1.88
RFX4Q33E94 AC113194.1-201ENST00000606037 500 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 MIR8084-201ENST00000614105 89 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 RMST_10.1-201ENST00000616309 154 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AC121761.2-201ENST00000617300 689 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
RFX4Q33E94 AC018816.2-201ENST00000621460 353 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.32□□□□□ -1.88
RFX4Q33E94 AC007823.1-201ENST00000569932 1566 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.32□□□□□ -1.88
RFX4Q33E94 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RFX4Q33E94 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RFX4Q33E94 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFX4Q33E94 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFX4Q33E94 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFX4Q33E94 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RFX4Q33E94 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.31□□□□□ -1.88
RFX4Q33E94 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFX4Q33E94 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AC008432.1-201ENST00000615912 1320 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFX4Q33E94 SNORA70.2-201ENST00000364506 135 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFX4Q33E94 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.31□□□□□ -1.88
RFX4Q33E94 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX4Q33E94 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX4Q33E94 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.31□□□□□ -1.88
RFX4Q33E94 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.31□□□□□ -1.88
RFX4Q33E94 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFX4Q33E94 RSL24D1P6-201ENST00000426934 401 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 BX890604.2-201ENST00000427883 474 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 RPS27AP12-201ENST00000429552 465 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.31□□□□□ -1.88
RFX4Q33E94 OR4C10P-201ENST00000434991 931 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 MTCYBP31-201ENST00000438855 1122 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AL645931.1-201ENST00000439737 410 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 RPL21P89-201ENST00000444021 467 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 AC068135.1-201ENST00000446164 246 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 AC092685.1-201ENST00000447960 1243 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 RPL23AP67-201ENST00000465341 474 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFX4Q33E94 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.31□□□□□ -1.88
RFX4Q33E94 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.31□□□□□ -1.88
RFX4Q33E94 TPT1P3-201ENST00000492841 512 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 SETP14-201ENST00000497538 873 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 AC008628.1-201ENST00000508663 265 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX4Q33E94 RNU6-352P-201ENST00000516908 107 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 MIR2116-201ENST00000517221 80 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.31□□□□□ -1.88
RFX4Q33E94 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX4Q33E94 HIGD1AP10-201ENST00000527837 282 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 AP000916.1-201ENST00000533869 835 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.31□□□□□ -1.88
RFX4Q33E94 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AC023161.2-201ENST00000551218 780 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFX4Q33E94 AC006077.1-201ENST00000604746 343 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.31□□□□□ -1.88
RFX4Q33E94 FRG1HP-204ENST00000617940 757 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 AC006213.5-201ENST00000619673 288 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 FP236240.3-201ENST00000623061 327 ntBASIC3.31□□□□□ -1.88
RFX4Q33E94 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFX4Q33E94 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RFX4Q33E94 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX4Q33E94 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFX4Q33E94 MTCO1P18-201ENST00000455518 1419 ntBASIC3.3□□□□□ -1.88
RFX4Q33E94 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.3□□□□□ -1.88
RFX4Q33E94 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFX4Q33E94 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFX4Q33E94 SNORA31-201ENST00000362607 130 ntBASIC3.3□□□□□ -1.88
RFX4Q33E94 SNORD56.4-201ENST00000363883 71 ntBASIC3.3□□□□□ -1.88
RFX4Q33E94 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
RFX4Q33E94 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFX4Q33E94 MTND4P22-201ENST00000413116 1169 ntBASIC3.3□□□□□ -1.88
RFX4Q33E94 AC007390.1-201ENST00000415722 356 ntBASIC3.3□□□□□ -1.88
RFX4Q33E94 AC234782.4-201ENST00000417646 1048 ntBASIC3.3□□□□□ -1.88
RFX4Q33E94 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX4Q33E94 AL606495.1-201ENST00000422100 813 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms