Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RN7SKP44-201ENST00000363602 316 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 Y_RNA.301-201ENST00000364990 103 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 RNY3P13-201ENST00000365542 102 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 MIR92A2-201ENST00000385299 75 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 AL354868.1-201ENST00000417077 482 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 CHIAP3-201ENST00000423668 1133 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 CRIP1P1-201ENST00000427567 185 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDH1Q08174 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDH1Q08174 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.68□□□□□ -1.5
PCDH1Q08174 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 RPL7P52-201ENST00000449200 742 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 AC104073.1-201ENST00000451988 151 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 PPIAP27-201ENST00000453800 265 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDH1Q08174 Z83838.1-202ENST00000456225 839 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 PLGLA-201ENST00000465668 449 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDH1Q08174 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDH1Q08174 SCARNA18.1-201ENST00000516330 83 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDH1Q08174 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDH1Q08174 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDH1Q08174 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.68□□□□□ -1.5
PCDH1Q08174 AC006512.2-201ENST00000543250 486 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 MIR4504-201ENST00000577413 92 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 AC060780.2-201ENST00000589047 198 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 APOOP1-201ENST00000604695 592 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 AC124303.1-201ENST00000605703 360 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 AL139099.4-201ENST00000614802 114 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 MIR6778-201ENST00000617912 73 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 AL596245.1-201ENST00000618994 362 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDH1Q08174 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDH1Q08174 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCDH1Q08174 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDH1Q08174 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCDH1Q08174 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDH1Q08174 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PCDH1Q08174 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDH1Q08174 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PCDH1Q08174 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
PCDH1Q08174 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDH1Q08174 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
PCDH1Q08174 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PCDH1Q08174 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDH1Q08174 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDH1Q08174 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDH1Q08174 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDH1Q08174 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDH1Q08174 RNU6-522P-201ENST00000364497 107 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 RN7SKP78-201ENST00000364711 318 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 Y_RNA.395-201ENST00000383945 109 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 RNA5SP345-201ENST00000410646 108 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 RPS3AP52-201ENST00000435639 297 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 UBE2V1P13-201ENST00000436983 439 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDH1Q08174 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDH1Q08174 RPL7L1P8-201ENST00000469911 741 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 AC006511.1-201ENST00000470614 315 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 AL136126.1-201ENST00000473603 402 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDH1Q08174 AC006539.1-201ENST00000481419 501 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 AC021382.1-201ENST00000483523 359 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 RN7SL170P-201ENST00000487098 295 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 AC093767.1-201ENST00000504523 156 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDH1Q08174 AC097486.1-201ENST00000515331 210 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDH1Q08174 AC112191.2-201ENST00000522428 333 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.67□□□□□ -1.5
PCDH1Q08174 AC024224.1-201ENST00000538284 609 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDH1Q08174 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDH1Q08174 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDH1Q08174 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDH1Q08174 AC007956.1-201ENST00000555623 542 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDH1Q08174 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDH1Q08174 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDH1Q08174 AL132822.1-201ENST00000617063 513 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDH1Q08174 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDH1Q08174 AC009902.3-201ENST00000606235 2172 ntBASIC5.67□□□□□ -1.5
PCDH1Q08174 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDH1Q08174 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDH1Q08174 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDH1Q08174 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDH1Q08174 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms