Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL16A1Q07092 OOSP1P2-201ENST00000579644 351 ntBASIC4.12□□□□□ -1.75
COL16A1Q07092 AL158827.2-201ENST00000602494 330 ntBASIC4.12□□□□□ -1.75
COL16A1Q07092 AC105148.1-201ENST00000604961 409 ntBASIC4.12□□□□□ -1.75
COL16A1Q07092 AC009159.1-201ENST00000618386 642 ntBASIC4.12□□□□□ -1.75
COL16A1Q07092 AL691447.3-201ENST00000635020 330 ntBASIC4.12□□□□□ -1.75
COL16A1Q07092 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL16A1Q07092 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL16A1Q07092 ZNF658B-202ENST00000615961 3375 ntBASIC4.11□□□□□ -1.75
COL16A1Q07092 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL16A1Q07092 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL16A1Q07092 SNORD15B-201ENST00000384714 146 ntBASIC4.11□□□□□ -1.75
COL16A1Q07092 HMGN2P8-201ENST00000391458 268 ntBASIC4.11□□□□□ -1.75
COL16A1Q07092 AL356968.1-201ENST00000416622 474 ntBASIC4.11□□□□□ -1.75
COL16A1Q07092 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.11□□□□□ -1.75
COL16A1Q07092 ETF1P3-201ENST00000430422 1160 ntBASIC4.11□□□□□ -1.75
COL16A1Q07092 CBX1P4-201ENST00000439415 457 ntBASIC4.11□□□□□ -1.75
COL16A1Q07092 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.11□□□□□ -1.75
COL16A1Q07092 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.11□□□□□ -1.75
COL16A1Q07092 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.11□□□□□ -1.75
COL16A1Q07092 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.11□□□□□ -1.75
COL16A1Q07092 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.11□□□□□ -1.75
COL16A1Q07092 FTH1P11-201ENST00000517577 551 ntBASIC4.11□□□□□ -1.75
COL16A1Q07092 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
COL16A1Q07092 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.11□□□□□ -1.75
COL16A1Q07092 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.11□□□□□ -1.75
COL16A1Q07092 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.11□□□□□ -1.75
COL16A1Q07092 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.11□□□□□ -1.75
COL16A1Q07092 AC079089.3-201ENST00000603094 673 ntBASIC4.11□□□□□ -1.75
COL16A1Q07092 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.11□□□□□ -1.75
COL16A1Q07092 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.11□□□□□ -1.75
COL16A1Q07092 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.11□□□□□ -1.75
COL16A1Q07092 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL16A1Q07092 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL16A1Q07092 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL16A1Q07092 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL16A1Q07092 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL16A1Q07092 MIR93-201ENST00000385024 80 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 USP9YP19-201ENST00000412165 485 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AC105402.1-201ENST00000413336 545 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AC017078.1-201ENST00000416146 368 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.1□□□□□ -1.75
COL16A1Q07092 SETP10-201ENST00000424368 814 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 FTH1P6-201ENST00000430768 320 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.1□□□□□ -1.75
COL16A1Q07092 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.1□□□□□ -1.75
COL16A1Q07092 OR52A4P-202ENST00000481634 799 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 RN7SL20P-201ENST00000488827 297 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.1□□□□□ -1.75
COL16A1Q07092 AP000873.5-201ENST00000533906 236 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.1□□□□□ -1.75
COL16A1Q07092 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.1□□□□□ -1.75
COL16A1Q07092 EIF1AXP2-201ENST00000555940 413 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.1□□□□□ -1.75
COL16A1Q07092 OR6R2P-201ENST00000609216 300 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AC010809.3-201ENST00000621310 641 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AC073592.7-201ENST00000623659 507 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.1□□□□□ -1.75
COL16A1Q07092 AP003122.5-201ENST00000527668 3766 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.1□□□□□ -1.75
COL16A1Q07092 AC108206.1-201ENST00000570186 4159 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL16A1Q07092 AP000568.1-201ENST00000282964 442 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.1□□□□□ -1.75
COL16A1Q07092 MIR184-201ENST00000384962 84 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 IFNA11P-201ENST00000446352 526 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 RN7SKP272-201ENST00000516988 232 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.1□□□□□ -1.75
COL16A1Q07092 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.1□□□□□ -1.75
COL16A1Q07092 AC090079.2-201ENST00000575289 768 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AC092574.1-201ENST00000609771 420 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AP003072.5-201ENST00000623872 773 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AC020923.1-201ENST00000624021 917 ntBASIC4.1□□□□□ -1.75
COL16A1Q07092 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
COL16A1Q07092 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
COL16A1Q07092 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.09□□□□□ -1.75
COL16A1Q07092 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL16A1Q07092 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL16A1Q07092 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL16A1Q07092 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL16A1Q07092 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL16A1Q07092 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.09□□□□□ -1.75
COL16A1Q07092 XKRY2-202ENST00000623874 1581 ntBASIC4.09□□□□□ -1.75
COL16A1Q07092 XKRY-202ENST00000624960 1581 ntBASIC4.09□□□□□ -1.75
COL16A1Q07092 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
COL16A1Q07092 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.09□□□□□ -1.75
COL16A1Q07092 MTND2P9-201ENST00000422293 931 ntBASIC4.09□□□□□ -1.76
COL16A1Q07092 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.09□□□□□ -1.76
COL16A1Q07092 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.09□□□□□ -1.76
COL16A1Q07092 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.09□□□□□ -1.76
COL16A1Q07092 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.09□□□□□ -1.76
COL16A1Q07092 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.09□□□□□ -1.76
COL16A1Q07092 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.09□□□□□ -1.76
COL16A1Q07092 AP000859.1-201ENST00000525536 307 ntBASIC4.09□□□□□ -1.76
COL16A1Q07092 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.09□□□□□ -1.76
COL16A1Q07092 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.09□□□□□ -1.76
COL16A1Q07092 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.09□□□□□ -1.76
COL16A1Q07092 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL16A1Q07092 AC107905.1-201ENST00000616204 426 ntBASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms