Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
NKX6-1P78426 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.63□□□□□ -1.67
NKX6-1P78426 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.63□□□□□ -1.67
NKX6-1P78426 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.63□□□□□ -1.67
NKX6-1P78426 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.63□□□□□ -1.67
NKX6-1P78426 RPL10P14-201ENST00000565265 298 ntBASIC4.63□□□□□ -1.67
NKX6-1P78426 MIR4458-201ENST00000578872 75 ntBASIC4.63□□□□□ -1.67
NKX6-1P78426 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.63□□□□□ -1.67
NKX6-1P78426 RN7SL52P-201ENST00000584271 284 ntBASIC4.63□□□□□ -1.67
NKX6-1P78426 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.63□□□□□ -1.67
NKX6-1P78426 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NKX6-1P78426 AC115621.1-201ENST00000604653 858 ntBASIC4.63□□□□□ -1.67
NKX6-1P78426 AL021997.1-201ENST00000605757 193 ntBASIC4.63□□□□□ -1.67
NKX6-1P78426 AC103710.1-201ENST00000610003 901 ntBASIC4.63□□□□□ -1.67
NKX6-1P78426 RN7SL722P-201ENST00000617780 284 ntBASIC4.63□□□□□ -1.67
NKX6-1P78426 RN7SL565P-201ENST00000618246 284 ntBASIC4.63□□□□□ -1.67
NKX6-1P78426 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.63□□□□□ -1.67
NKX6-1P78426 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NKX6-1P78426 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
NKX6-1P78426 AC092447.10-201ENST00000620607 1652 ntBASIC4.63□□□□□ -1.67
NKX6-1P78426 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NKX6-1P78426 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.63□□□□□ -1.67
NKX6-1P78426 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NKX6-1P78426 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.63□□□□□ -1.67
NKX6-1P78426 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NKX6-1P78426 AC100757.1-201ENST00000616872 1835 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX6-1P78426 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
NKX6-1P78426 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX6-1P78426 AL672167.1-205ENST00000641112 3080 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX6-1P78426 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX6-1P78426 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
NKX6-1P78426 SNORA17.1-201ENST00000362945 126 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 RNU5A-6P-201ENST00000384136 116 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NKX6-1P78426 PPIAP9-201ENST00000403866 498 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 OR4K12P-201ENST00000406538 961 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NKX6-1P78426 Y_RNA.608-201ENST00000410647 95 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 RN7SKP126-201ENST00000411143 300 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX6-1P78426 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX6-1P78426 AC007742.1-201ENST00000425789 329 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AC104837.2-201ENST00000427236 424 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX6-1P78426 AC010975.2-201ENST00000427781 588 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX6-1P78426 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX6-1P78426 NMNAT1P2-201ENST00000435192 860 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 ELOCP26-201ENST00000436067 329 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.62□□□□□ -1.67
NKX6-1P78426 AC091862.1-201ENST00000438016 1100 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 MTND6P18-201ENST00000439477 513 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 FAM103A2P-201ENST00000444122 354 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 RNA5SP103-201ENST00000459503 118 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 RPS3AP41-201ENST00000462701 778 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 KLF3P2-201ENST00000465138 268 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 RN7SL738P-201ENST00000470264 297 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AC104763.1-201ENST00000475274 360 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 BX284632.1-201ENST00000478218 541 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX6-1P78426 OR5H5P-201ENST00000503164 928 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.62□□□□□ -1.67
NKX6-1P78426 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX6-1P78426 AL117351.2-201ENST00000513571 157 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 RNU6-714P-201ENST00000516963 103 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 SCARNA20.4-201ENST00000516969 131 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX6-1P78426 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.62□□□□□ -1.67
NKX6-1P78426 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX6-1P78426 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.62□□□□□ -1.67
NKX6-1P78426 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.62□□□□□ -1.67
NKX6-1P78426 HNRNPCP4-201ENST00000571636 900 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AC127024.5-201ENST00000580085 462 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX6-1P78426 AC138749.5-201ENST00000611461 208 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AC116165.2-201ENST00000616705 206 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AC104010.1-201ENST00000616889 150 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AL596245.1-201ENST00000618994 362 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 CYP4F35P-202ENST00000636121 390 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX6-1P78426 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX6-1P78426 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX6-1P78426 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX6-1P78426 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NKX6-1P78426 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX6-1P78426 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX6-1P78426 CCT4P2-201ENST00000233836 1548 ntBASIC4.62□□□□□ -1.67
NKX6-1P78426 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX6-1P78426 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX6-1P78426 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX6-1P78426 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AC015813.6-201ENST00000624409 5808 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms