Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 USP9YP20-201ENST00000419224 558 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXG1P55316 AC012498.1-201ENST00000424037 437 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 CKS1BP6-201ENST00000424932 240 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 AC233728.2-201ENST00000425348 757 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXG1P55316 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXG1P55316 FABP7P2-201ENST00000429946 379 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXG1P55316 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXG1P55316 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXG1P55316 AC004938.1-201ENST00000438468 308 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 YWHAZP2-201ENST00000440317 728 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 HMGB3P9-201ENST00000441799 583 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 AL035551.1-201ENST00000446931 348 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXG1P55316 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXG1P55316 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXG1P55316 AL133244.1-201ENST00000456007 258 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXG1P55316 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXG1P55316 AC096741.1-201ENST00000472250 846 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXG1P55316 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXG1P55316 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.14□□□□□ -1.75
FOXG1P55316 AC018442.3-201ENST00000523025 183 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 AP002453.2-201ENST00000533503 320 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
FOXG1P55316 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.14□□□□□ -1.75
FOXG1P55316 AC063949.1-201ENST00000552900 865 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXG1P55316 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXG1P55316 AP005119.2-201ENST00000579735 1105 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXG1P55316 AC087045.1-201ENST00000605856 382 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 AC091834.1-201ENST00000614543 472 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 MIR6780A-201ENST00000615089 68 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 AC015914.2-201ENST00000618167 288 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 AC138649.3-201ENST00000622154 254 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 AC007342.8-201ENST00000623278 678 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXG1P55316 LRRC77P-213ENST00000637727 880 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXG1P55316 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXG1P55316 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXG1P55316 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXG1P55316 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXG1P55316 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXG1P55316 AL034370.1-201ENST00000397254 1590 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXG1P55316 AC000123.3-201ENST00000624029 4975 ntBASIC4.14□□□□□ -1.75
FOXG1P55316 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXG1P55316 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXG1P55316 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXG1P55316 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXG1P55316 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
FOXG1P55316 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
FOXG1P55316 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
FOXG1P55316 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 DDX18P3-201ENST00000404856 2007 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXG1P55316 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 AC079741.1-201ENST00000321498 212 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
FOXG1P55316 Y_RNA.372-201ENST00000365599 102 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXG1P55316 SNORA56-201ENST00000383966 129 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 RNU6-185P-201ENST00000384421 107 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 MIR320B1-201ENST00000390209 79 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 AL049697.2-201ENST00000403708 294 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 MTCYBP36-201ENST00000404146 440 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 CIR1P3-201ENST00000405137 479 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 CCNG1P1-201ENST00000406783 885 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXG1P55316 AC140479.3-201ENST00000418944 1126 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXG1P55316 AC009237.2-201ENST00000421358 284 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXG1P55316 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXG1P55316 AC016831.4-201ENST00000438302 307 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXG1P55316 MTND6P18-201ENST00000439477 513 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXG1P55316 AC011753.3-201ENST00000443436 406 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXG1P55316 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXG1P55316 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXG1P55316 DPPA3P1-201ENST00000448050 469 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
FOXG1P55316 AC013267.1-201ENST00000458227 267 ntBASIC4.13□□□□□ -1.75
FOXG1P55316 RPS23P1-201ENST00000491662 432 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms