Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH6P55285 AC073387.1-201ENST00000453261 709 ntBASIC3.63□□□□□ -1.83
CDH6P55285 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH6P55285 AC104619.4-201ENST00000510773 249 ntBASIC3.63□□□□□ -1.83
CDH6P55285 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH6P55285 RN7SKP277-201ENST00000516895 283 ntBASIC3.63□□□□□ -1.83
CDH6P55285 AC023632.4-201ENST00000517783 191 ntBASIC3.63□□□□□ -1.83
CDH6P55285 TRMT10BP1-201ENST00000519377 943 ntBASIC3.63□□□□□ -1.83
CDH6P55285 MTND2P26-201ENST00000528255 1029 ntBASIC3.63□□□□□ -1.83
CDH6P55285 AP004242.1-201ENST00000533701 349 ntBASIC3.63□□□□□ -1.83
CDH6P55285 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH6P55285 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.63□□□□□ -1.83
CDH6P55285 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH6P55285 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH6P55285 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH6P55285 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH6P55285 AL109618.2-201ENST00000605527 211 ntBASIC3.63□□□□□ -1.83
CDH6P55285 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
CDH6P55285 AL359535.1-201ENST00000612100 1087 ntBASIC3.63□□□□□ -1.83
CDH6P55285 MIR8058-201ENST00000615737 89 ntBASIC3.63□□□□□ -1.83
CDH6P55285 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH6P55285 MIR4278-201ENST00000636094 69 ntBASIC3.63□□□□□ -1.83
CDH6P55285 U6.107-201ENST00000637108 79 ntBASIC3.63□□□□□ -1.83
CDH6P55285 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH6P55285 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH6P55285 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH6P55285 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH6P55285 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH6P55285 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDH6P55285 MIR134-201ENST00000385258 73 ntBASIC3.62□□□□□ -1.83
CDH6P55285 AC069218.2-201ENST00000411665 344 ntBASIC3.62□□□□□ -1.83
CDH6P55285 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH6P55285 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH6P55285 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH6P55285 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.62□□□□□ -1.83
CDH6P55285 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH6P55285 CABYRP1-201ENST00000465493 1045 ntBASIC3.62□□□□□ -1.83
CDH6P55285 AL672167.3-201ENST00000465951 960 ntBASIC3.62□□□□□ -1.83
CDH6P55285 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH6P55285 AC005726.1-201ENST00000494679 427 ntBASIC3.62□□□□□ -1.83
CDH6P55285 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH6P55285 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH6P55285 RPL7L1P13-201ENST00000511702 739 ntBASIC3.62□□□□□ -1.83
CDH6P55285 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH6P55285 AC093755.1-201ENST00000512950 1023 ntBASIC3.62□□□□□ -1.83
CDH6P55285 SNORA48.9-201ENST00000516419 162 ntBASIC3.62□□□□□ -1.83
CDH6P55285 SNORA70.19-201ENST00000516717 90 ntBASIC3.62□□□□□ -1.83
CDH6P55285 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH6P55285 AC010306.1-201ENST00000523223 1117 ntBASIC3.62□□□□□ -1.83
CDH6P55285 CIR1P1-201ENST00000524055 1133 ntBASIC3.62□□□□□ -1.83
CDH6P55285 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH6P55285 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH6P55285 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH6P55285 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH6P55285 TGIF1P1-201ENST00000558095 802 ntBASIC3.62□□□□□ -1.83
CDH6P55285 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH6P55285 KATNBL1P1-201ENST00000605192 748 ntBASIC3.62□□□□□ -1.83
CDH6P55285 U7.8-201ENST00000619968 63 ntBASIC3.62□□□□□ -1.83
CDH6P55285 AL357559.1-201ENST00000622228 274 ntBASIC3.62□□□□□ -1.83
CDH6P55285 AC039056.2-201ENST00000622261 511 ntBASIC3.62□□□□□ -1.83
CDH6P55285 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH6P55285 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.62□□□□□ -1.83
CDH6P55285 MFSD8-233ENST00000641482 4860 ntBASIC3.62□□□□□ -1.83
CDH6P55285 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDH6P55285 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CDH6P55285 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH6P55285 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH6P55285 AC011978.2-201ENST00000569835 2054 ntBASIC3.61□□□□□ -1.83
CDH6P55285 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CDH6P55285 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH6P55285 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH6P55285 RNU6-883P-201ENST00000384597 107 ntBASIC3.61□□□□□ -1.83
CDH6P55285 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH6P55285 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH6P55285 SYF2P2-201ENST00000417620 583 ntBASIC3.61□□□□□ -1.83
CDH6P55285 CR848007.2-201ENST00000424918 787 ntBASIC3.61□□□□□ -1.83
CDH6P55285 AC122718.1-201ENST00000439448 744 ntBASIC3.61□□□□□ -1.83
CDH6P55285 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH6P55285 RPL23AP33-201ENST00000442301 452 ntBASIC3.61□□□□□ -1.83
CDH6P55285 BX276092.4-201ENST00000452056 248 ntBASIC3.61□□□□□ -1.83
CDH6P55285 AC007967.1-201ENST00000455422 1159 ntBASIC3.61□□□□□ -1.83
CDH6P55285 snoU13.7-201ENST00000459220 104 ntBASIC3.61□□□□□ -1.83
CDH6P55285 FAM133DP-201ENST00000464802 691 ntBASIC3.61□□□□□ -1.83
CDH6P55285 RN7SL330P-201ENST00000469709 307 ntBASIC3.61□□□□□ -1.83
CDH6P55285 AC126121.1-201ENST00000482313 553 ntBASIC3.61□□□□□ -1.83
CDH6P55285 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH6P55285 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH6P55285 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH6P55285 RN7SKP96-201ENST00000516948 297 ntBASIC3.61□□□□□ -1.83
CDH6P55285 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH6P55285 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH6P55285 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH6P55285 OR6C73P-201ENST00000546432 358 ntBASIC3.61□□□□□ -1.83
CDH6P55285 ZNF192P1-203ENST00000565888 810 ntBASIC3.61□□□□□ -1.83
CDH6P55285 MIR4425-201ENST00000580572 84 ntBASIC3.61□□□□□ -1.83
CDH6P55285 AC090312.2-201ENST00000582687 378 ntBASIC3.61□□□□□ -1.83
CDH6P55285 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH6P55285 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH6P55285 AC006254.3-201ENST00000603353 884 ntBASIC3.61□□□□□ -1.83
CDH6P55285 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms