Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AL138721.1-201ENST00000616756 179 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 MIR7154-201ENST00000620673 73 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AL445363.3-201ENST00000623080 671 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC004777.1-201ENST00000624317 287 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCNKAP51800 MIR4278-201ENST00000636094 69 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 MIR492-201ENST00000638676 116 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CLCNKAP51800 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCNKAP51800 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CLCNKAP51800 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCNKAP51800 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCNKAP51800 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCNKAP51800 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CLCNKAP51800 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CLCNKAP51800 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 AC087190.4-201ENST00000574616 8334 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 AC012020.1-201ENST00000624541 1728 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 RNA5SP52-201ENST00000362448 134 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 MIR124-3-201ENST00000384866 87 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 AL356131.1-201ENST00000405826 414 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AL133264.1-201ENST00000407157 562 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCNKAP51800 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCNKAP51800 AC009518.2-201ENST00000418056 731 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 RBMY1KP-201ENST00000423480 476 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 RPL23AP38-201ENST00000423801 469 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 USP9YP11-201ENST00000427537 717 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCNKAP51800 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 RPL23AP15-201ENST00000450202 459 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCNKAP51800 AL122001.1-201ENST00000457027 370 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 RN7SL41P-201ENST00000476144 297 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 BET1P1-201ENST00000482276 359 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 AC010486.3-201ENST00000511602 785 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCNKAP51800 AC099522.1-202ENST00000514718 367 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 RNU6-202P-201ENST00000515998 96 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 RNU6-1225P-201ENST00000516336 65 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 SNORA31.9-201ENST00000516429 84 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 RNA5SP519-201ENST00000516480 119 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 MRPL49P2-201ENST00000521066 465 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.19□□□□□ -1.74
CLCNKAP51800 AC005832.3-201ENST00000537929 631 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC069240.1-201ENST00000548774 375 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 GTF2IP8-201ENST00000560687 584 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCNKAP51800 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 SLC25A36P1-201ENST00000590111 465 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 AC008687.2-201ENST00000597865 520 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AL109653.1-201ENST00000603091 248 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AL161729.3-201ENST00000603533 673 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC018638.7-201ENST00000605836 1114 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC092653.1-201ENST00000608509 531 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC121761.2-201ENST00000617300 689 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCNKAP51800 AC124312.6-202ENST00000623624 418 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC116618.1-201ENST00000634617 774 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 AC068620.4-201ENST00000636730 1182 ntBASIC4.19□□□□□ -1.74
CLCNKAP51800 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCNKAP51800 LARP1BP1-201ENST00000506036 1359 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.18□□□□□ -1.74
CLCNKAP51800 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLCNKAP51800 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLCNKAP51800 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLCNKAP51800 RNU5D-1-201ENST00000363299 116 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLCNKAP51800 SNORD116-23-201ENST00000384645 92 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 RNU6-1300P-201ENST00000391046 108 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 SNORD66.1-201ENST00000391230 76 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 RPS26P8-201ENST00000393490 348 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 ATP5F1P3-201ENST00000397213 657 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 RPL23AP47-201ENST00000408017 460 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 RNU2-42P-201ENST00000410697 113 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 AC004022.2-201ENST00000413824 193 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 PRELID3BP11-201ENST00000414230 479 ntBASIC4.18□□□□□ -1.74
CLCNKAP51800 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms