Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC108860.1-201ENST00000484521 383 ntBASIC2.98□□□□□ -1.93
SRP9P49458 RPL21P129-201ENST00000491732 478 ntBASIC2.98□□□□□ -1.93
SRP9P49458 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.98□□□□□ -1.93
SRP9P49458 ATG10-AS1-201ENST00000504846 648 ntBASIC2.98□□□□□ -1.93
SRP9P49458 AC006499.5-201ENST00000505037 514 ntBASIC2.98□□□□□ -1.93
SRP9P49458 HMGN1P15-201ENST00000513870 295 ntBASIC2.98□□□□□ -1.93
SRP9P49458 RNA5SP385-201ENST00000515947 110 ntBASIC2.98□□□□□ -1.93
SRP9P49458 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.98□□□□□ -1.93
SRP9P49458 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.98□□□□□ -1.93
SRP9P49458 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.98□□□□□ -1.93
SRP9P49458 AC139769.3-201ENST00000618383 175 ntBASIC2.98□□□□□ -1.93
SRP9P49458 AL590240.3-201ENST00000621416 943 ntBASIC2.98□□□□□ -1.93
SRP9P49458 U4.6-201ENST00000621618 127 ntBASIC2.98□□□□□ -1.93
SRP9P49458 AC244258.1-201ENST00000637553 1071 ntBASIC2.98□□□□□ -1.93
SRP9P49458 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.98□□□□□ -1.93
SRP9P49458 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SRP9P49458 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
SRP9P49458 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SRP9P49458 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.97□□□□□ -1.93
SRP9P49458 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SRP9P49458 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.97□□□□□ -1.93
SRP9P49458 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SRP9P49458 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SRP9P49458 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SRP9P49458 SNORA48.7-201ENST00000391302 135 ntBASIC2.97□□□□□ -1.93
SRP9P49458 AL031121.1-201ENST00000406553 254 ntBASIC2.97□□□□□ -1.93
SRP9P49458 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.97□□□□□ -1.93
SRP9P49458 HMGN2P31-201ENST00000432430 273 ntBASIC2.97□□□□□ -1.93
SRP9P49458 HMGB1P45-201ENST00000435986 653 ntBASIC2.97□□□□□ -1.93
SRP9P49458 AC009969.1-201ENST00000438726 172 ntBASIC2.97□□□□□ -1.93
SRP9P49458 HMGB3P11-201ENST00000440127 604 ntBASIC2.97□□□□□ -1.93
SRP9P49458 VN1R34P-201ENST00000447387 883 ntBASIC2.97□□□□□ -1.93
SRP9P49458 AL157884.3-201ENST00000448273 1184 ntBASIC2.97□□□□□ -1.93
SRP9P49458 OR7L1P-201ENST00000456181 380 ntBASIC2.97□□□□□ -1.93
SRP9P49458 HMGN2P16-201ENST00000456802 261 ntBASIC2.97□□□□□ -1.93
SRP9P49458 AP002371.1-201ENST00000463604 433 ntBASIC2.97□□□□□ -1.93
SRP9P49458 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.97□□□□□ -1.93
SRP9P49458 RN7SKP13-201ENST00000515933 244 ntBASIC2.97□□□□□ -1.93
SRP9P49458 SNORA70.18-201ENST00000516696 98 ntBASIC2.97□□□□□ -1.93
SRP9P49458 SNORA31.26-201ENST00000517250 137 ntBASIC2.97□□□□□ -1.93
SRP9P49458 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SRP9P49458 OR5B10P-201ENST00000532869 642 ntBASIC2.97□□□□□ -1.93
SRP9P49458 AP000619.3-201ENST00000535634 1127 ntBASIC2.97□□□□□ -1.93
SRP9P49458 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.97□□□□□ -1.93
SRP9P49458 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.97□□□□□ -1.93
SRP9P49458 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.97□□□□□ -1.93
SRP9P49458 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.97□□□□□ -1.93
SRP9P49458 MIR1254-2-201ENST00000579553 63 ntBASIC2.97□□□□□ -1.93
SRP9P49458 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.97□□□□□ -1.93
SRP9P49458 AC116563.2-201ENST00000624751 535 ntBASIC2.97□□□□□ -1.93
SRP9P49458 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SRP9P49458 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SRP9P49458 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SRP9P49458 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
SRP9P49458 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
SRP9P49458 AL122126.1-201ENST00000546905 1318 ntBASIC2.96□□□□□ -1.93
SRP9P49458 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.96□□□□□ -1.93
SRP9P49458 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SRP9P49458 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SRP9P49458 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SRP9P49458 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SRP9P49458 RNU6-600P-201ENST00000362524 99 ntBASIC2.96□□□□□ -1.94
SRP9P49458 RNA5SP50-201ENST00000363731 107 ntBASIC2.96□□□□□ -1.94
SRP9P49458 RNU6-356P-201ENST00000384140 107 ntBASIC2.96□□□□□ -1.94
SRP9P49458 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SRP9P49458 MIR887-201ENST00000401258 79 ntBASIC2.96□□□□□ -1.94
SRP9P49458 AL583834.1-201ENST00000406943 343 ntBASIC2.96□□□□□ -1.94
SRP9P49458 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.96□□□□□ -1.94
SRP9P49458 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.96□□□□□ -1.94
SRP9P49458 CRYBB2P1-203ENST00000415709 538 ntBASIC2.96□□□□□ -1.94
SRP9P49458 AC006960.1-201ENST00000419980 153 ntBASIC2.96□□□□□ -1.94
SRP9P49458 AC069157.1-201ENST00000421749 137 ntBASIC2.96□□□□□ -1.94
SRP9P49458 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.96□□□□□ -1.94
SRP9P49458 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.96□□□□□ -1.94
SRP9P49458 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.96□□□□□ -1.94
SRP9P49458 AC091286.1-201ENST00000431233 461 ntBASIC2.96□□□□□ -1.94
SRP9P49458 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.96□□□□□ -1.94
SRP9P49458 AC006994.1-201ENST00000438212 839 ntBASIC2.96□□□□□ -1.94
SRP9P49458 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.96□□□□□ -1.94
SRP9P49458 AC022336.1-201ENST00000475510 337 ntBASIC2.96□□□□□ -1.94
SRP9P49458 NCOR1P1-202ENST00000486162 291 ntBASIC2.96□□□□□ -1.94
SRP9P49458 RNU1-143P-201ENST00000516296 146 ntBASIC2.96□□□□□ -1.94
SRP9P49458 AC245166.1-201ENST00000521012 253 ntBASIC2.96□□□□□ -1.94
SRP9P49458 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SRP9P49458 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.96□□□□□ -1.94
SRP9P49458 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.96□□□□□ -1.94
SRP9P49458 MIR3690-201ENST00000580266 75 ntBASIC2.96□□□□□ -1.94
SRP9P49458 MAGOH2P-202ENST00000584384 429 ntBASIC2.96□□□□□ -1.94
SRP9P49458 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.96□□□□□ -1.94
SRP9P49458 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.96□□□□□ -1.94
SRP9P49458 U1.23-201ENST00000610293 146 ntBASIC2.96□□□□□ -1.94
SRP9P49458 AC243654.2-201ENST00000612843 443 ntBASIC2.96□□□□□ -1.94
SRP9P49458 RNU1-68P-201ENST00000615382 146 ntBASIC2.96□□□□□ -1.94
SRP9P49458 U1.39-201ENST00000621562 146 ntBASIC2.96□□□□□ -1.94
SRP9P49458 AC112200.1-201ENST00000625015 234 ntBASIC2.96□□□□□ -1.94
SRP9P49458 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms