Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.15□□□□□ -1.59
ATF4P18848 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.15□□□□□ -1.59
ATF4P18848 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.15□□□□□ -1.59
ATF4P18848 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.15□□□□□ -1.59
ATF4P18848 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.15□□□□□ -1.59
ATF4P18848 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.15□□□□□ -1.59
ATF4P18848 XIAPP1-201ENST00000603162 600 ntBASIC5.15□□□□□ -1.59
ATF4P18848 AC010680.3-201ENST00000604215 520 ntBASIC5.15□□□□□ -1.59
ATF4P18848 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.15□□□□□ -1.59
ATF4P18848 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.15□□□□□ -1.59
ATF4P18848 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATF4P18848 EIF3FP1-201ENST00000613970 806 ntBASIC5.15□□□□□ -1.59
ATF4P18848 AC004241.2-201ENST00000614562 444 ntBASIC5.15□□□□□ -1.59
ATF4P18848 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATF4P18848 AC110801.1-201ENST00000623590 212 ntBASIC5.15□□□□□ -1.59
ATF4P18848 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATF4P18848 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATF4P18848 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATF4P18848 AL512329.1-201ENST00000404600 1592 ntBASIC5.15□□□□□ -1.59
ATF4P18848 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ATF4P18848 AL391684.1-202ENST00000641293 1636 ntBASIC5.15□□□□□ -1.59
ATF4P18848 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.15□□□□□ -1.59
ATF4P18848 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATF4P18848 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
ATF4P18848 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATF4P18848 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
ATF4P18848 XIAPP3-201ENST00000312918 795 ntBASIC5.14□□□□□ -1.59
ATF4P18848 SNORA23-201ENST00000365128 182 ntBASIC5.14□□□□□ -1.59
ATF4P18848 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
ATF4P18848 RNU6-1074P-201ENST00000383995 104 ntBASIC5.14□□□□□ -1.59
ATF4P18848 MIR99A-201ENST00000384906 81 ntBASIC5.14□□□□□ -1.59
ATF4P18848 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATF4P18848 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.14□□□□□ -1.59
ATF4P18848 RNU2-29P-201ENST00000410423 189 ntBASIC5.14□□□□□ -1.59
ATF4P18848 RN7SKP268-201ENST00000411107 316 ntBASIC5.14□□□□□ -1.59
ATF4P18848 RPL7AP73-201ENST00000413490 353 ntBASIC5.14□□□□□ -1.59
ATF4P18848 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.14□□□□□ -1.59
ATF4P18848 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.14□□□□□ -1.59
ATF4P18848 AC009161.1-201ENST00000417306 376 ntBASIC5.14□□□□□ -1.59
ATF4P18848 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.14□□□□□ -1.59
ATF4P18848 AC016027.5-201ENST00000427227 210 ntBASIC5.14□□□□□ -1.59
ATF4P18848 RPL34P6-201ENST00000432390 345 ntBASIC5.14□□□□□ -1.59
ATF4P18848 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.14□□□□□ -1.59
ATF4P18848 MTND4LP16-201ENST00000440828 295 ntBASIC5.14□□□□□ -1.59
ATF4P18848 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 CBWD4P-201ENST00000445695 655 ntBASIC5.14□□□□□ -1.59
ATF4P18848 TDGF1P1-201ENST00000445734 527 ntBASIC5.14□□□□□ -1.59
ATF4P18848 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 RPL23AP43-201ENST00000446445 471 ntBASIC5.14□□□□□ -1.59
ATF4P18848 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.14□□□□□ -1.59
ATF4P18848 RPS29P15-201ENST00000458329 171 ntBASIC5.14□□□□□ -1.59
ATF4P18848 RN7SL492P-201ENST00000460700 295 ntBASIC5.14□□□□□ -1.59
ATF4P18848 RN7SL372P-201ENST00000461982 298 ntBASIC5.14□□□□□ -1.59
ATF4P18848 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.14□□□□□ -1.59
ATF4P18848 PPIAP19-201ENST00000486414 492 ntBASIC5.14□□□□□ -1.59
ATF4P18848 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.14□□□□□ -1.59
ATF4P18848 EIF4EP3-201ENST00000498782 656 ntBASIC5.14□□□□□ -1.59
ATF4P18848 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.14□□□□□ -1.59
ATF4P18848 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.14□□□□□ -1.59
ATF4P18848 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.14□□□□□ -1.59
ATF4P18848 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.14□□□□□ -1.59
ATF4P18848 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.14□□□□□ -1.59
ATF4P18848 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.14□□□□□ -1.59
ATF4P18848 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.14□□□□□ -1.59
ATF4P18848 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 RN7SL32P-201ENST00000580514 281 ntBASIC5.14□□□□□ -1.59
ATF4P18848 MIR4775-201ENST00000581168 75 ntBASIC5.14□□□□□ -1.59
ATF4P18848 AC018638.8-201ENST00000588755 281 ntBASIC5.14□□□□□ -1.59
ATF4P18848 AC010525.2-201ENST00000590920 195 ntBASIC5.14□□□□□ -1.59
ATF4P18848 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.14□□□□□ -1.59
ATF4P18848 AC008626.2-201ENST00000624425 248 ntBASIC5.14□□□□□ -1.59
ATF4P18848 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 OR4G1P-203ENST00000641984 1631 ntBASIC5.14□□□□□ -1.59
ATF4P18848 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
ATF4P18848 AL136964.1-201ENST00000622038 2990 ntBASIC5.14□□□□□ -1.59
ATF4P18848 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 MTND4P14-201ENST00000435799 1354 ntBASIC5.14□□□□□ -1.59
ATF4P18848 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATF4P18848 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.13□□□□□ -1.59
ATF4P18848 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.13□□□□□ -1.59
ATF4P18848 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATF4P18848 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.13□□□□□ -1.59
ATF4P18848 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATF4P18848 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms