Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.97□□□□□ -1.77
VCLP18206 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.97□□□□□ -1.77
VCLP18206 HIGD1AP3-201ENST00000515857 278 ntBASIC3.97□□□□□ -1.77
VCLP18206 Vault.1-201ENST00000516474 102 ntBASIC3.97□□□□□ -1.77
VCLP18206 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.97□□□□□ -1.77
VCLP18206 MTND1P6-201ENST00000523621 946 ntBASIC3.97□□□□□ -1.77
VCLP18206 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.97□□□□□ -1.77
VCLP18206 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.97□□□□□ -1.77
VCLP18206 GNRHR2P1-201ENST00000555315 631 ntBASIC3.97□□□□□ -1.77
VCLP18206 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.97□□□□□ -1.77
VCLP18206 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.97□□□□□ -1.77
VCLP18206 VN1R85P-201ENST00000601587 426 ntBASIC3.97□□□□□ -1.77
VCLP18206 AC099785.1-201ENST00000605697 437 ntBASIC3.97□□□□□ -1.77
VCLP18206 HSPE1P14-201ENST00000605812 302 ntBASIC3.97□□□□□ -1.77
VCLP18206 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.97□□□□□ -1.77
VCLP18206 AP000255.1-201ENST00000610276 676 ntBASIC3.97□□□□□ -1.77
VCLP18206 AL391261.4-201ENST00000616012 481 ntBASIC3.97□□□□□ -1.77
VCLP18206 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.97□□□□□ -1.77
VCLP18206 AC124312.6-202ENST00000623624 418 ntBASIC3.97□□□□□ -1.77
VCLP18206 AC004943.3-201ENST00000624116 600 ntBASIC3.97□□□□□ -1.77
VCLP18206 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.97□□□□□ -1.77
VCLP18206 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.97□□□□□ -1.77
VCLP18206 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
VCLP18206 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
VCLP18206 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.96□□□□□ -1.78
VCLP18206 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
VCLP18206 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.96□□□□□ -1.78
VCLP18206 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.96□□□□□ -1.78
VCLP18206 RNU1-18P-201ENST00000363062 164 ntBASIC3.96□□□□□ -1.78
VCLP18206 RNU6-619P-201ENST00000365146 108 ntBASIC3.96□□□□□ -1.78
VCLP18206 RNU6-441P-201ENST00000384545 106 ntBASIC3.96□□□□□ -1.78
VCLP18206 RNU4-6P-201ENST00000410804 122 ntBASIC3.96□□□□□ -1.78
VCLP18206 RPL31P2-201ENST00000413849 377 ntBASIC3.96□□□□□ -1.78
VCLP18206 SFR1P2-201ENST00000421841 730 ntBASIC3.96□□□□□ -1.78
VCLP18206 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.96□□□□□ -1.78
VCLP18206 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.96□□□□□ -1.78
VCLP18206 HIGD1AP4-201ENST00000430194 280 ntBASIC3.96□□□□□ -1.78
VCLP18206 USP9YP7-201ENST00000436723 430 ntBASIC3.96□□□□□ -1.78
VCLP18206 VN1R25P-201ENST00000443385 738 ntBASIC3.96□□□□□ -1.78
VCLP18206 USP9YP32-201ENST00000452432 430 ntBASIC3.96□□□□□ -1.78
VCLP18206 VN1R40P-201ENST00000455196 941 ntBASIC3.96□□□□□ -1.78
VCLP18206 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.96□□□□□ -1.78
VCLP18206 AC011352.3-201ENST00000505162 593 ntBASIC3.96□□□□□ -1.78
VCLP18206 AC104057.1-201ENST00000515547 497 ntBASIC3.96□□□□□ -1.78
VCLP18206 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.96□□□□□ -1.78
VCLP18206 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.96□□□□□ -1.78
VCLP18206 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCLP18206 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.96□□□□□ -1.78
VCLP18206 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.96□□□□□ -1.78
VCLP18206 AC022968.1-201ENST00000567372 442 ntBASIC3.96□□□□□ -1.78
VCLP18206 AC090666.1-201ENST00000578241 445 ntBASIC3.96□□□□□ -1.78
VCLP18206 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.96□□□□□ -1.78
VCLP18206 AL606490.9-201ENST00000603331 271 ntBASIC3.96□□□□□ -1.78
VCLP18206 AP002802.2-201ENST00000605877 235 ntBASIC3.96□□□□□ -1.78
VCLP18206 MIR6868-201ENST00000611215 58 ntBASIC3.96□□□□□ -1.78
VCLP18206 AC024941.1-201ENST00000612250 334 ntBASIC3.96□□□□□ -1.78
VCLP18206 AC007275.1-201ENST00000621243 671 ntBASIC3.96□□□□□ -1.78
VCLP18206 RNA5SP196-201ENST00000625967 102 ntBASIC3.96□□□□□ -1.78
VCLP18206 MTND5P31-201ENST00000419366 1374 ntBASIC3.96□□□□□ -1.78
VCLP18206 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.96□□□□□ -1.78
VCLP18206 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.96□□□□□ -1.78
VCLP18206 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.96□□□□□ -1.78
VCLP18206 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCLP18206 LINC00561-201ENST00000565815 2738 ntBASIC3.95□□□□□ -1.78
VCLP18206 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
VCLP18206 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VCLP18206 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.95□□□□□ -1.78
VCLP18206 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCLP18206 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCLP18206 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCLP18206 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VCLP18206 MTCO3P31-201ENST00000405526 789 ntBASIC3.95□□□□□ -1.78
VCLP18206 MTND4P22-201ENST00000413116 1169 ntBASIC3.95□□□□□ -1.78
VCLP18206 RPL7AP73-201ENST00000413490 353 ntBASIC3.95□□□□□ -1.78
VCLP18206 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.95□□□□□ -1.78
VCLP18206 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 PTP4A1P7-201ENST00000423476 514 ntBASIC3.95□□□□□ -1.78
VCLP18206 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.95□□□□□ -1.78
VCLP18206 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 B3GNT2P1-201ENST00000434960 952 ntBASIC3.95□□□□□ -1.78
VCLP18206 AC096638.2-201ENST00000434965 711 ntBASIC3.95□□□□□ -1.78
VCLP18206 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.95□□□□□ -1.78
VCLP18206 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 AC008427.1-201ENST00000503102 655 ntBASIC3.95□□□□□ -1.78
VCLP18206 AC010460.1-201ENST00000507087 466 ntBASIC3.95□□□□□ -1.78
VCLP18206 AC104417.1-201ENST00000523974 751 ntBASIC3.95□□□□□ -1.78
VCLP18206 OR4R3P-201ENST00000525084 838 ntBASIC3.95□□□□□ -1.78
VCLP18206 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VCLP18206 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
VCLP18206 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.95□□□□□ -1.78
VCLP18206 BNIP3P5-201ENST00000562290 498 ntBASIC3.95□□□□□ -1.78
VCLP18206 AC120057.2-201ENST00000571520 271 ntBASIC3.95□□□□□ -1.78
VCLP18206 AC067959.1-201ENST00000604334 379 ntBASIC3.95□□□□□ -1.78
VCLP18206 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms