Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.81□□□□□ -1.16
CD44P16070 AL022394.1-201ENST00000606979 292 ntBASIC7.81□□□□□ -1.16
CD44P16070 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC7.81□□□□□ -1.16
CD44P16070 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 AC091544.5-201ENST00000620192 3815 ntBASIC7.81□□□□□ -1.16
CD44P16070 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 MIR1245B-201ENST00000636115 69 ntBASIC7.81□□□□□ -1.16
CD44P16070 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.81□□□□□ -1.16
CD44P16070 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.81□□□□□ -1.16
CD44P16070 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.81□□□□□ -1.16
CD44P16070 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
CD44P16070 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.81□□□□□ -1.16
CD44P16070 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CD44P16070 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 AP001642.1-201ENST00000624727 2117 ntBASIC7.81□□□□□ -1.16
CD44P16070 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CD44P16070 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.8□□□□□ -1.16
CD44P16070 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.8□□□□□ -1.16
CD44P16070 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
CD44P16070 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
CD44P16070 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.8□□□□□ -1.16
CD44P16070 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC7.8□□□□□ -1.16
CD44P16070 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC7.8□□□□□ -1.16
CD44P16070 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC7.8□□□□□ -1.16
CD44P16070 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.8□□□□□ -1.16
CD44P16070 AC090049.2-201ENST00000550377 109 ntBASIC7.8□□□□□ -1.16
CD44P16070 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC7.8□□□□□ -1.16
CD44P16070 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.8□□□□□ -1.16
CD44P16070 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.8□□□□□ -1.16
CD44P16070 AC073488.7-201ENST00000633785 778 ntBASIC7.8□□□□□ -1.16
CD44P16070 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.8□□□□□ -1.16
CD44P16070 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC7.8□□□□□ -1.16
CD44P16070 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC7.8□□□□□ -1.16
CD44P16070 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CD44P16070 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CD44P16070 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.8□□□□□ -1.16
CD44P16070 AP002800.1-201ENST00000624982 2225 ntBASIC7.79□□□□□ -1.16
CD44P16070 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
CD44P16070 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CD44P16070 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CD44P16070 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CD44P16070 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CD44P16070 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CD44P16070 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.79□□□□□ -1.16
CD44P16070 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CD44P16070 SDHCP3-201ENST00000445371 506 ntBASIC7.79□□□□□ -1.16
CD44P16070 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 AC004692.1-201ENST00000455430 424 ntBASIC7.79□□□□□ -1.16
CD44P16070 TECRP2-201ENST00000503270 928 ntBASIC7.79□□□□□ -1.16
CD44P16070 RN7SKP70-201ENST00000516655 271 ntBASIC7.79□□□□□ -1.16
CD44P16070 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.79□□□□□ -1.16
CD44P16070 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.79□□□□□ -1.16
CD44P16070 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CD44P16070 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
CD44P16070 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
CD44P16070 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.79□□□□□ -1.16
CD44P16070 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CD44P16070 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.79□□□□□ -1.16
CD44P16070 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CD44P16070 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CD44P16070 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
CD44P16070 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CD44P16070 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CD44P16070 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CD44P16070 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CD44P16070 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.78□□□□□ -1.16
CD44P16070 RNU4-81P-201ENST00000363561 144 ntBASIC7.78□□□□□ -1.16
CD44P16070 RNU6-1017P-201ENST00000363613 106 ntBASIC7.78□□□□□ -1.16
CD44P16070 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CD44P16070 RN7SKP271-201ENST00000410528 320 ntBASIC7.78□□□□□ -1.16
CD44P16070 RPL7AP73-201ENST00000413490 353 ntBASIC7.78□□□□□ -1.16
CD44P16070 PPIAP30-201ENST00000415473 519 ntBASIC7.78□□□□□ -1.16
CD44P16070 AL354707.3-201ENST00000427308 331 ntBASIC7.78□□□□□ -1.16
CD44P16070 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC7.78□□□□□ -1.16
CD44P16070 AL139135.2-201ENST00000445040 433 ntBASIC7.78□□□□□ -1.16
CD44P16070 AC025271.1-201ENST00000485045 429 ntBASIC7.78□□□□□ -1.16
CD44P16070 AC016559.1-201ENST00000511420 199 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms