Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL596275.2-206ENST00000641957 626 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
COL5A2P05997 ZNF90P1-201ENST00000480493 1951 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.27□□□□□ -1.73
COL5A2P05997 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A2P05997 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A2P05997 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL5A2P05997 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
COL5A2P05997 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.26□□□□□ -1.73
COL5A2P05997 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL5A2P05997 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
COL5A2P05997 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A2P05997 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A2P05997 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A2P05997 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.26□□□□□ -1.73
COL5A2P05997 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A2P05997 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.26□□□□□ -1.73
COL5A2P05997 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.26□□□□□ -1.73
COL5A2P05997 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.26□□□□□ -1.73
COL5A2P05997 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.26□□□□□ -1.73
COL5A2P05997 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A2P05997 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
COL5A2P05997 MTATP6P14-201ENST00000455189 673 ntBASIC4.26□□□□□ -1.73
COL5A2P05997 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.26□□□□□ -1.73
COL5A2P05997 AC098862.1-201ENST00000504991 413 ntBASIC4.26□□□□□ -1.73
COL5A2P05997 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.26□□□□□ -1.73
COL5A2P05997 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A2P05997 AL358913.1-201ENST00000554342 121 ntBASIC4.26□□□□□ -1.73
COL5A2P05997 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.26□□□□□ -1.73
COL5A2P05997 AC004223.2-201ENST00000590309 544 ntBASIC4.26□□□□□ -1.73
COL5A2P05997 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.26□□□□□ -1.73
COL5A2P05997 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.26□□□□□ -1.73
COL5A2P05997 MIR486-1-201ENST00000612171 68 ntBASIC4.26□□□□□ -1.73
COL5A2P05997 uc_338.25-201ENST00000613756 156 ntBASIC4.26□□□□□ -1.73
COL5A2P05997 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.26□□□□□ -1.73
COL5A2P05997 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A2P05997 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A2P05997 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A2P05997 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A2P05997 OR5BR1P-201ENST00000524992 1330 ntBASIC4.26□□□□□ -1.73
COL5A2P05997 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A2P05997 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COL5A2P05997 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A2P05997 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
COL5A2P05997 RNU6-618P-201ENST00000363518 112 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 SNORA27.3-201ENST00000364937 134 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 RN7SKP247-201ENST00000411094 308 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 AC012065.2-201ENST00000421295 375 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 AC073464.3-201ENST00000422564 712 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 MTCO2P1-201ENST00000424648 477 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 AL445528.1-201ENST00000426330 420 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 RPL7P28-201ENST00000437739 740 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 AF228730.2-201ENST00000438784 848 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 HMGB3P9-201ENST00000441799 583 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A2P05997 UBE2V1P12-201ENST00000503954 474 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 RN7SKP116-201ENST00000516902 319 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 AC068339.2-201ENST00000534395 618 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A2P05997 GTF3AP2-201ENST00000557014 266 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 AC015917.1-201ENST00000579654 510 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 AL355802.4-201ENST00000607635 548 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 AC004908.3-201ENST00000610248 625 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.25□□□□□ -1.73
COL5A2P05997 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.25□□□□□ -1.73
COL5A2P05997 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.25□□□□□ -1.73
COL5A2P05997 AC119674.1-220ENST00000641502 1048 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A2P05997 SRP72P2-201ENST00000344851 1979 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL5A2P05997 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A2P05997 RIOK3P1-201ENST00000418778 1528 ntBASIC4.25□□□□□ -1.73
COL5A2P05997 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A2P05997 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A2P05997 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.25□□□□□ -1.73
COL5A2P05997 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
COL5A2P05997 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A2P05997 FTLP6-201ENST00000355274 422 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A2P05997 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC126124.2-201ENST00000413542 321 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 RPL23AP82-202ENST00000427528 469 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC073508.1-201ENST00000428866 656 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.24□□□□□ -1.73
COL5A2P05997 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.24□□□□□ -1.73
COL5A2P05997 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A2P05997 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A2P05997 RPS6P2-201ENST00000454208 705 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.24□□□□□ -1.73
COL5A2P05997 CENPBD1P1-201ENST00000464061 469 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.24□□□□□ -1.73
COL5A2P05997 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.24□□□□□ -1.73
COL5A2P05997 HNRNPKP5-201ENST00000515300 253 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A2P05997 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A2P05997 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.24□□□□□ -1.73
COL5A2P05997 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.24□□□□□ -1.73
COL5A2P05997 AC093510.2-201ENST00000562820 896 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 CD24P2-201ENST00000565486 219 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 MIR3945-201ENST00000581853 98 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms