Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC112184.1-201ENST00000505179 312 ntBASIC1.83□□□□□ -2.12
APOBP04114 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC1.83□□□□□ -2.12
APOBP04114 AADACP1-206ENST00000561502 1193 ntBASIC1.83□□□□□ -2.12
APOBP04114 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC1.83□□□□□ -2.12
APOBP04114 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
APOBP04114 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
APOBP04114 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
APOBP04114 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
APOBP04114 RPL21P132-201ENST00000331267 462 ntBASIC1.83□□□□□ -2.12
APOBP04114 Y_RNA.466-201ENST00000384294 113 ntBASIC1.83□□□□□ -2.12
APOBP04114 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
APOBP04114 AC008280.2-201ENST00000455473 307 ntBASIC1.83□□□□□ -2.12
APOBP04114 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.83□□□□□ -2.12
APOBP04114 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.83□□□□□ -2.12
APOBP04114 MYL12AP1-201ENST00000518490 515 ntBASIC1.83□□□□□ -2.12
APOBP04114 AL158827.2-201ENST00000602494 330 ntBASIC1.83□□□□□ -2.12
APOBP04114 AL354950.1-201ENST00000614150 568 ntBASIC1.83□□□□□ -2.12
APOBP04114 AL691447.3-201ENST00000635020 330 ntBASIC1.83□□□□□ -2.12
APOBP04114 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
APOBP04114 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.83□□□□□ -2.12
APOBP04114 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.83□□□□□ -2.12
APOBP04114 AC063976.3-201ENST00000426849 329 ntBASIC1.83□□□□□ -2.12
APOBP04114 ARL5AP4-201ENST00000430731 512 ntBASIC1.83□□□□□ -2.12
APOBP04114 RPS26P40-201ENST00000435209 294 ntBASIC1.83□□□□□ -2.12
APOBP04114 AL162389.1-201ENST00000449233 177 ntBASIC1.83□□□□□ -2.12
APOBP04114 HMGN2P23-201ENST00000456759 269 ntBASIC1.83□□□□□ -2.12
APOBP04114 TRBV8-2-201ENST00000475637 270 ntBASIC1.83□□□□□ -2.12
APOBP04114 RN7SL499P-201ENST00000481141 276 ntBASIC1.83□□□□□ -2.12
APOBP04114 AC111000.2-201ENST00000507775 550 ntBASIC1.83□□□□□ -2.12
APOBP04114 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.83□□□□□ -2.12
APOBP04114 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
APOBP04114 ELF2P3-201ENST00000445099 1506 ntBASIC1.83□□□□□ -2.12
APOBP04114 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
APOBP04114 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
APOBP04114 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
APOBP04114 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
APOBP04114 U3.42-201ENST00000408746 214 ntBASIC1.83□□□□□ -2.12
APOBP04114 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC1.83□□□□□ -2.12
APOBP04114 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC1.83□□□□□ -2.12
APOBP04114 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
APOBP04114 SYT14P1-201ENST00000481459 721 ntBASIC1.83□□□□□ -2.12
APOBP04114 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.83□□□□□ -2.12
APOBP04114 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC1.83□□□□□ -2.12
APOBP04114 AC022882.1-201ENST00000532142 501 ntBASIC1.83□□□□□ -2.12
APOBP04114 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.83□□□□□ -2.12
APOBP04114 AC006840.1-201ENST00000623069 542 ntBASIC1.83□□□□□ -2.12
APOBP04114 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC1.83□□□□□ -2.12
APOBP04114 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC1.82□□□□□ -2.12
APOBP04114 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC1.82□□□□□ -2.12
APOBP04114 MAPK10-322ENST00000641485 4530 ntBASIC1.82□□□□□ -2.12
APOBP04114 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
APOBP04114 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.82□□□□□ -2.12
APOBP04114 SETP15-201ENST00000412724 337 ntBASIC1.82□□□□□ -2.12
APOBP04114 VTA1P1-201ENST00000414044 866 ntBASIC1.82□□□□□ -2.12
APOBP04114 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.82□□□□□ -2.12
APOBP04114 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.82□□□□□ -2.12
APOBP04114 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 DEFB122-202ENST00000569013 197 ntBASIC1.82□□□□□ -2.12
APOBP04114 AL034351.1-201ENST00000605288 668 ntBASIC1.82□□□□□ -2.12
APOBP04114 HMGB1P50-201ENST00000605814 607 ntBASIC1.82□□□□□ -2.12
APOBP04114 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
APOBP04114 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
APOBP04114 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
APOBP04114 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
APOBP04114 OR1S2-201ENST00000302592 978 ntBASIC1.82□□□□□ -2.12
APOBP04114 RNA5SP322-201ENST00000363617 119 ntBASIC1.82□□□□□ -2.12
APOBP04114 AL356968.1-201ENST00000416622 474 ntBASIC1.82□□□□□ -2.12
APOBP04114 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC1.82□□□□□ -2.12
APOBP04114 FAM103A2P-201ENST00000444122 354 ntBASIC1.82□□□□□ -2.12
APOBP04114 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.82□□□□□ -2.12
APOBP04114 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC1.82□□□□□ -2.12
APOBP04114 AC008837.1-201ENST00000511513 412 ntBASIC1.82□□□□□ -2.12
APOBP04114 MIR2276-201ENST00000516886 89 ntBASIC1.82□□□□□ -2.12
APOBP04114 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
APOBP04114 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.82□□□□□ -2.12
APOBP04114 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
APOBP04114 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
APOBP04114 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 AP001025.2-201ENST00000490908 477 ntBASIC1.82□□□□□ -2.12
APOBP04114 CKS1BP2-201ENST00000497342 240 ntBASIC1.82□□□□□ -2.12
APOBP04114 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 SEC11B-201ENST00000518383 499 ntBASIC1.82□□□□□ -2.12
APOBP04114 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBP04114 AC009039.2-201ENST00000624524 529 ntBASIC1.82□□□□□ -2.12
APOBP04114 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.82□□□□□ -2.12
APOBP04114 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC1.82□□□□□ -2.12
APOBP04114 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC1.82□□□□□ -2.12
APOBP04114 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
APOBP04114 OR5BR1P-201ENST00000524992 1330 ntBASIC1.82□□□□□ -2.12
APOBP04114 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
APOBP04114 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
APOBP04114 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
APOBP04114 AL139415.2-201ENST00000431968 163 ntBASIC1.81□□□□□ -2.12
APOBP04114 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms