Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC087897.1-201ENST00000550134 156 ntBASIC4.06□□□□□ -1.76
VTNP04004 AC084757.1-201ENST00000559987 490 ntBASIC4.06□□□□□ -1.76
VTNP04004 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.06□□□□□ -1.76
VTNP04004 AGGF1P5-201ENST00000567900 919 ntBASIC4.06□□□□□ -1.76
VTNP04004 AL160237.3-201ENST00000604114 1013 ntBASIC4.06□□□□□ -1.76
VTNP04004 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
VTNP04004 PART1_2.1-201ENST00000612397 250 ntBASIC4.06□□□□□ -1.76
VTNP04004 AC131238.1-201ENST00000617135 328 ntBASIC4.06□□□□□ -1.76
VTNP04004 AC015967.1-201ENST00000619893 476 ntBASIC4.06□□□□□ -1.76
VTNP04004 AC008993.2-201ENST00000631744 806 ntBASIC4.06□□□□□ -1.76
VTNP04004 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.06□□□□□ -1.76
VTNP04004 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VTNP04004 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.06□□□□□ -1.76
VTNP04004 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
VTNP04004 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.06□□□□□ -1.76
VTNP04004 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VTNP04004 AC097504.1-201ENST00000515103 2415 ntBASIC4.05□□□□□ -1.76
VTNP04004 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VTNP04004 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VTNP04004 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
VTNP04004 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VTNP04004 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.05□□□□□ -1.76
VTNP04004 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VTNP04004 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VTNP04004 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VTNP04004 Y_RNA.333-201ENST00000365274 102 ntBASIC4.05□□□□□ -1.76
VTNP04004 RHOT1P2-201ENST00000366423 333 ntBASIC4.05□□□□□ -1.76
VTNP04004 MIR183-201ENST00000384958 110 ntBASIC4.05□□□□□ -1.76
VTNP04004 MIR218-2-201ENST00000385006 110 ntBASIC4.05□□□□□ -1.76
VTNP04004 MIR93-201ENST00000385024 80 ntBASIC4.05□□□□□ -1.76
VTNP04004 LAP3P1-201ENST00000403648 294 ntBASIC4.05□□□□□ -1.76
VTNP04004 RNU2-65P-201ENST00000410162 185 ntBASIC4.05□□□□□ -1.76
VTNP04004 RNU2-6P-201ENST00000411404 190 ntBASIC4.05□□□□□ -1.76
VTNP04004 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.05□□□□□ -1.76
VTNP04004 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 USP9YP21-201ENST00000420603 432 ntBASIC4.05□□□□□ -1.76
VTNP04004 AC245054.1-201ENST00000420944 258 ntBASIC4.05□□□□□ -1.76
VTNP04004 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.05□□□□□ -1.76
VTNP04004 NANOGP5-201ENST00000424456 877 ntBASIC4.05□□□□□ -1.76
VTNP04004 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 HMGB1P45-201ENST00000435986 653 ntBASIC4.05□□□□□ -1.76
VTNP04004 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.05□□□□□ -1.76
VTNP04004 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 AL031313.1-201ENST00000448435 256 ntBASIC4.05□□□□□ -1.76
VTNP04004 IFNWP4-201ENST00000453148 294 ntBASIC4.05□□□□□ -1.76
VTNP04004 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VTNP04004 RPL37P3-201ENST00000456825 293 ntBASIC4.05□□□□□ -1.76
VTNP04004 RNU7-140P-201ENST00000459546 60 ntBASIC4.05□□□□□ -1.76
VTNP04004 AC079203.1-201ENST00000487972 404 ntBASIC4.05□□□□□ -1.76
VTNP04004 AC026414.1-201ENST00000504046 698 ntBASIC4.05□□□□□ -1.76
VTNP04004 AC110768.1-201ENST00000509222 400 ntBASIC4.05□□□□□ -1.76
VTNP04004 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.05□□□□□ -1.76
VTNP04004 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.05□□□□□ -1.76
VTNP04004 PRELID3BP4-201ENST00000515476 571 ntBASIC4.05□□□□□ -1.76
VTNP04004 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.05□□□□□ -1.76
VTNP04004 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.05□□□□□ -1.76
VTNP04004 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.05□□□□□ -1.76
VTNP04004 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.05□□□□□ -1.76
VTNP04004 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
VTNP04004 SRGNP1-201ENST00000603392 451 ntBASIC4.05□□□□□ -1.76
VTNP04004 RPP40P2-201ENST00000603596 712 ntBASIC4.05□□□□□ -1.76
VTNP04004 AC010591.1-201ENST00000603941 649 ntBASIC4.05□□□□□ -1.76
VTNP04004 AC006946.3-201ENST00000609791 756 ntBASIC4.05□□□□□ -1.76
VTNP04004 VN1R74P-201ENST00000613259 503 ntBASIC4.05□□□□□ -1.76
VTNP04004 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.05□□□□□ -1.76
VTNP04004 AL121594.5-201ENST00000631724 573 ntBASIC4.05□□□□□ -1.76
VTNP04004 U6.105-201ENST00000637379 88 ntBASIC4.05□□□□□ -1.76
VTNP04004 AP000553.6-201ENST00000641242 118 ntBASIC4.05□□□□□ -1.76
VTNP04004 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VTNP04004 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VTNP04004 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VTNP04004 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.05□□□□□ -1.76
VTNP04004 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.05□□□□□ -1.76
VTNP04004 MTCO1P12-201ENST00000414273 1543 ntBASIC4.05□□□□□ -1.76
VTNP04004 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VTNP04004 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VTNP04004 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VTNP04004 AC090337.1-201ENST00000579651 2074 ntBASIC4.04□□□□□ -1.76
VTNP04004 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VTNP04004 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VTNP04004 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VTNP04004 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.04□□□□□ -1.76
VTNP04004 RNU6-1339P-201ENST00000363574 91 ntBASIC4.04□□□□□ -1.76
VTNP04004 RNU6-353P-201ENST00000364266 108 ntBASIC4.04□□□□□ -1.76
VTNP04004 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VTNP04004 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.04□□□□□ -1.76
VTNP04004 MTND4P3-201ENST00000417829 541 ntBASIC4.04□□□□□ -1.76
VTNP04004 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.04□□□□□ -1.76
VTNP04004 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.04□□□□□ -1.76
VTNP04004 AL358794.1-201ENST00000445689 381 ntBASIC4.04□□□□□ -1.76
VTNP04004 YWHAQP9-201ENST00000445891 512 ntBASIC4.04□□□□□ -1.76
VTNP04004 PRDX3P3-201ENST00000447765 522 ntBASIC4.04□□□□□ -1.76
VTNP04004 AC006480.1-201ENST00000449887 378 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms