Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.79□□□□□ -1.96
SPTA1P02549 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.79□□□□□ -1.96
SPTA1P02549 AC026790.2-201ENST00000606282 430 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 AC099506.2-201ENST00000623074 221 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SPTA1P02549 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SPTA1P02549 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SPTA1P02549 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
SPTA1P02549 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.78□□□□□ -1.96
SPTA1P02549 ARL5AP4-201ENST00000430731 512 ntBASIC2.78□□□□□ -1.96
SPTA1P02549 ELOCP8-201ENST00000439309 332 ntBASIC2.78□□□□□ -1.96
SPTA1P02549 RPSAP41-201ENST00000439695 860 ntBASIC2.78□□□□□ -1.96
SPTA1P02549 ELOCP15-201ENST00000442090 332 ntBASIC2.78□□□□□ -1.96
SPTA1P02549 RPS24P13-201ENST00000442520 397 ntBASIC2.78□□□□□ -1.96
SPTA1P02549 AC083906.5-201ENST00000503722 328 ntBASIC2.78□□□□□ -1.96
SPTA1P02549 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SPTA1P02549 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.78□□□□□ -1.96
SPTA1P02549 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.78□□□□□ -1.96
SPTA1P02549 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.78□□□□□ -1.96
SPTA1P02549 AC074276.2-201ENST00000619891 348 ntBASIC2.78□□□□□ -1.96
SPTA1P02549 AC243829.7-201ENST00000633081 225 ntBASIC2.78□□□□□ -1.96
SPTA1P02549 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.78□□□□□ -1.96
SPTA1P02549 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
SPTA1P02549 NOL8P1-201ENST00000508336 3529 ntBASIC2.78□□□□□ -1.96
SPTA1P02549 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SPTA1P02549 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
SPTA1P02549 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SPTA1P02549 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SPTA1P02549 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.78□□□□□ -1.96
SPTA1P02549 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.78□□□□□ -1.96
SPTA1P02549 MIR1289-2-201ENST00000408360 111 ntBASIC2.78□□□□□ -1.97
SPTA1P02549 RN7SKP223-201ENST00000410582 62 ntBASIC2.78□□□□□ -1.97
SPTA1P02549 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.78□□□□□ -1.97
SPTA1P02549 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.78□□□□□ -1.97
SPTA1P02549 RN7SL20P-201ENST00000488827 297 ntBASIC2.78□□□□□ -1.97
SPTA1P02549 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.78□□□□□ -1.97
SPTA1P02549 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.78□□□□□ -1.97
SPTA1P02549 AC011270.1-201ENST00000558606 583 ntBASIC2.78□□□□□ -1.97
SPTA1P02549 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.78□□□□□ -1.97
SPTA1P02549 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.78□□□□□ -1.97
SPTA1P02549 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.78□□□□□ -1.97
SPTA1P02549 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
SPTA1P02549 AL360182.1-201ENST00000397433 468 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 AC105402.1-201ENST00000413336 545 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC2.77□□□□□ -1.97
SPTA1P02549 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.77□□□□□ -1.97
SPTA1P02549 KATNBL1P2-201ENST00000433311 835 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 UBE2D3P1-201ENST00000436669 444 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.77□□□□□ -1.97
SPTA1P02549 KLHL2P1-201ENST00000508691 521 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
SPTA1P02549 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.77□□□□□ -1.97
SPTA1P02549 SULT1C2P2-201ENST00000562517 294 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 CYCSP39-201ENST00000565821 309 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 AC233702.9-201ENST00000581528 203 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.77□□□□□ -1.97
SPTA1P02549 uc_338.25-201ENST00000613756 156 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 AL354950.1-201ENST00000614150 568 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SPTA1P02549 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
SPTA1P02549 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SPTA1P02549 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
SPTA1P02549 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.77□□□□□ -1.97
SPTA1P02549 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.77□□□□□ -1.97
SPTA1P02549 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SPTA1P02549 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.77□□□□□ -1.97
SPTA1P02549 SKP1P1-201ENST00000438081 489 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 SEPT14P1-201ENST00000458703 648 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 RPL36AP21-201ENST00000490372 323 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 SNORA70.19-201ENST00000516717 90 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 OR5AP1P-201ENST00000529730 940 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 AC006518.1-201ENST00000541449 943 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 AADACP1-206ENST00000561502 1193 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 OR7M1P-201ENST00000608946 533 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.77□□□□□ -1.97
SPTA1P02549 AC073476.4-201ENST00000628409 72 ntBASIC2.77□□□□□ -1.97
SPTA1P02549 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SPTA1P02549 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SPTA1P02549 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SPTA1P02549 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SPTA1P02549 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SPTA1P02549 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.76□□□□□ -1.97
SPTA1P02549 AL445528.1-201ENST00000426330 420 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SPTA1P02549 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.76□□□□□ -1.97
SPTA1P02549 OR4K7P-201ENST00000580232 945 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 AL035413.2-201ENST00000604801 525 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 AC006840.1-201ENST00000623069 542 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SPTA1P02549 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SPTA1P02549 AC105074.1-201ENST00000623380 3095 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SPTA1P02549 RPS24P12-201ENST00000402084 394 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 HMGB3P12-201ENST00000438745 556 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 AC124916.1-201ENST00000444020 547 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 ACTG1P13-201ENST00000486987 1043 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 AC005798.1-201ENST00000513715 387 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 IGHV3-63-201ENST00000518422 341 ntBASIC2.76□□□□□ -1.97
SPTA1P02549 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.76□□□□□ -1.97
SPTA1P02549 AC107016.2-201ENST00000547968 190 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms