Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL2A1P02458 BX842559.1-201ENST00000419615 532 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 RNF19BPX-201ENST00000426224 625 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 YWHAEP5-201ENST00000431545 765 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 RPL7P34-201ENST00000433316 712 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.08□□□□□ -1.76
COL2A1P02458 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.08□□□□□ -1.76
COL2A1P02458 EXOSC3P1-201ENST00000448649 500 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AC233982.1-201ENST00000451247 436 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.08□□□□□ -1.76
COL2A1P02458 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.08□□□□□ -1.76
COL2A1P02458 MTCYBP14-201ENST00000457471 715 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 RPS4XP2-201ENST00000458402 793 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.08□□□□□ -1.76
COL2A1P02458 AC096576.1-201ENST00000489014 359 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.08□□□□□ -1.76
COL2A1P02458 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.08□□□□□ -1.76
COL2A1P02458 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.08□□□□□ -1.76
COL2A1P02458 AL117351.2-201ENST00000513571 157 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.08□□□□□ -1.76
COL2A1P02458 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.08□□□□□ -1.76
COL2A1P02458 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.08□□□□□ -1.76
COL2A1P02458 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.08□□□□□ -1.76
COL2A1P02458 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.08□□□□□ -1.76
COL2A1P02458 MIR5004-201ENST00000579078 107 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.08□□□□□ -1.76
COL2A1P02458 CKS1BP3-201ENST00000600888 237 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 GAS5-AS1-201ENST00000602767 694 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AL450336.1-201ENST00000605180 586 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 BRDTP1-201ENST00000605735 677 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AC098679.4-201ENST00000624241 654 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AL590396.4-201ENST00000636779 956 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 MTCO1P22-201ENST00000604619 1360 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AL353743.1-202ENST00000431724 1695 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AL645937.1-201ENST00000641739 1652 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.08□□□□□ -1.76
COL2A1P02458 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.08□□□□□ -1.76
COL2A1P02458 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL2A1P02458 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
COL2A1P02458 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
COL2A1P02458 AL133383.2-201ENST00000622958 2336 ntBASIC4.08□□□□□ -1.76
COL2A1P02458 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.07□□□□□ -1.76
COL2A1P02458 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.07□□□□□ -1.76
COL2A1P02458 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
COL2A1P02458 MTND4P5-201ENST00000435821 1374 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.07□□□□□ -1.76
COL2A1P02458 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
COL2A1P02458 RNU6-283P-201ENST00000364788 107 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL2A1P02458 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL2A1P02458 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.07□□□□□ -1.76
COL2A1P02458 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.07□□□□□ -1.76
COL2A1P02458 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.07□□□□□ -1.76
COL2A1P02458 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.07□□□□□ -1.76
COL2A1P02458 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.07□□□□□ -1.76
COL2A1P02458 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.07□□□□□ -1.76
COL2A1P02458 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.07□□□□□ -1.76
COL2A1P02458 Z75741.1-201ENST00000446793 314 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.07□□□□□ -1.76
COL2A1P02458 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.07□□□□□ -1.76
COL2A1P02458 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
COL2A1P02458 MTCO2P9-201ENST00000503214 694 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 AC010468.3-201ENST00000508225 458 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 MTND1P22-201ENST00000510572 951 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.07□□□□□ -1.76
COL2A1P02458 AP003033.1-201ENST00000527244 415 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.07□□□□□ -1.76
COL2A1P02458 MTND2P17-201ENST00000550281 688 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.07□□□□□ -1.76
COL2A1P02458 AC245036.5-201ENST00000596330 847 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 AC006557.5-201ENST00000603126 811 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 AC073657.2-201ENST00000605661 303 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 AC007275.1-201ENST00000621243 671 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 DDX6P1-205ENST00000441966 1436 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 MTND5P12-201ENST00000502851 1449 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL2A1P02458 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL2A1P02458 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL2A1P02458 AC019072.1-201ENST00000604535 1551 ntBASIC4.07□□□□□ -1.76
COL2A1P02458 AC096656.1-201ENST00000623826 1364 ntBASIC4.06□□□□□ -1.76
COL2A1P02458 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL2A1P02458 ANKRD36P1-201ENST00000344424 659 ntBASIC4.06□□□□□ -1.76
COL2A1P02458 RNA5SP374-201ENST00000362939 125 ntBASIC4.06□□□□□ -1.76
COL2A1P02458 TAF9BP1-201ENST00000396646 746 ntBASIC4.06□□□□□ -1.76
COL2A1P02458 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.06□□□□□ -1.76
COL2A1P02458 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.06□□□□□ -1.76
COL2A1P02458 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.06□□□□□ -1.76
COL2A1P02458 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.06□□□□□ -1.76
COL2A1P02458 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.06□□□□□ -1.76
COL2A1P02458 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.06□□□□□ -1.76
COL2A1P02458 TXNL1P1-201ENST00000429528 554 ntBASIC4.06□□□□□ -1.76
COL2A1P02458 DNAJC19P1-201ENST00000455312 319 ntBASIC4.06□□□□□ -1.76
COL2A1P02458 AC078857.1-201ENST00000469870 667 ntBASIC4.06□□□□□ -1.76
COL2A1P02458 RPL23AP73-201ENST00000492507 471 ntBASIC4.06□□□□□ -1.76
COL2A1P02458 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.06□□□□□ -1.76
COL2A1P02458 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.06□□□□□ -1.76
COL2A1P02458 AC112198.1-201ENST00000505369 1220 ntBASIC4.06□□□□□ -1.76
COL2A1P02458 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms