Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF40O75150 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RNF40O75150 TPTE2P4-201ENST00000258589 1605 ntBASIC6.99□□□□□ -1.29
RNF40O75150 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RNF40O75150 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.99□□□□□ -1.29
RNF40O75150 AL121886.1-201ENST00000358609 435 ntBASIC6.99□□□□□ -1.29
RNF40O75150 Y_RNA.297-201ENST00000364950 91 ntBASIC6.99□□□□□ -1.29
RNF40O75150 Y_RNA.576-201ENST00000384781 102 ntBASIC6.99□□□□□ -1.29
RNF40O75150 MIR1275-201ENST00000408770 80 ntBASIC6.99□□□□□ -1.29
RNF40O75150 AC116036.1-201ENST00000412199 367 ntBASIC6.99□□□□□ -1.29
RNF40O75150 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.99□□□□□ -1.29
RNF40O75150 BX682237.1-201ENST00000415016 335 ntBASIC6.99□□□□□ -1.29
RNF40O75150 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.99□□□□□ -1.29
RNF40O75150 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.99□□□□□ -1.29
RNF40O75150 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.99□□□□□ -1.29
RNF40O75150 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.99□□□□□ -1.29
RNF40O75150 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.99□□□□□ -1.29
RNF40O75150 CBX1P4-201ENST00000439415 457 ntBASIC6.99□□□□□ -1.29
RNF40O75150 RPL12P11-201ENST00000439970 501 ntBASIC6.99□□□□□ -1.29
RNF40O75150 GAPDHP20-201ENST00000444107 1007 ntBASIC6.99□□□□□ -1.29
RNF40O75150 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.99□□□□□ -1.29
RNF40O75150 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.99□□□□□ -1.29
RNF40O75150 RN7SL165P-201ENST00000477476 291 ntBASIC6.99□□□□□ -1.29
RNF40O75150 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.99□□□□□ -1.29
RNF40O75150 AC093852.1-201ENST00000503587 266 ntBASIC6.99□□□□□ -1.29
RNF40O75150 PGAM1P13-201ENST00000507497 754 ntBASIC6.99□□□□□ -1.29
RNF40O75150 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.99□□□□□ -1.29
RNF40O75150 RNU6-1069P-201ENST00000516612 133 ntBASIC6.99□□□□□ -1.29
RNF40O75150 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.99□□□□□ -1.29
RNF40O75150 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.99□□□□□ -1.29
RNF40O75150 DUX4L52-201ENST00000549363 777 ntBASIC6.99□□□□□ -1.29
RNF40O75150 AC005519.1-201ENST00000554490 601 ntBASIC6.99□□□□□ -1.29
RNF40O75150 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.99□□□□□ -1.29
RNF40O75150 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.99□□□□□ -1.29
RNF40O75150 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
RNF40O75150 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RNF40O75150 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
RNF40O75150 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
RNF40O75150 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF40O75150 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.99□□□□□ -1.29
RNF40O75150 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.99□□□□□ -1.29
RNF40O75150 AC129502.1-201ENST00000623261 1654 ntBASIC6.99□□□□□ -1.29
RNF40O75150 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.99□□□□□ -1.29
RNF40O75150 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF40O75150 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 AL138713.1-201ENST00000624026 2130 ntBASIC6.98□□□□□ -1.29
RNF40O75150 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 AC097714.1-201ENST00000511272 1647 ntBASIC6.98□□□□□ -1.29
RNF40O75150 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF40O75150 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
RNF40O75150 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 Y_RNA.2-201ENST00000362330 96 ntBASIC6.98□□□□□ -1.29
RNF40O75150 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
RNF40O75150 RNU6-95P-201ENST00000384697 107 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AL590635.1-201ENST00000406314 586 ntBASIC6.98□□□□□ -1.29
RNF40O75150 MIR548H3-201ENST00000408771 118 ntBASIC6.98□□□□□ -1.29
RNF40O75150 RN7SKP86-201ENST00000410454 332 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF40O75150 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF40O75150 USP9YP30-201ENST00000430729 455 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AL590128.1-201ENST00000433407 286 ntBASIC6.98□□□□□ -1.29
RNF40O75150 RPL36AP6-201ENST00000435770 321 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AC097359.1-201ENST00000447946 463 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AC243772.1-201ENST00000451620 410 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.98□□□□□ -1.29
RNF40O75150 HMGB1P4-201ENST00000455362 567 ntBASIC6.98□□□□□ -1.29
RNF40O75150 SCARNA18-201ENST00000459004 134 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AC104472.2-201ENST00000469035 601 ntBASIC6.98□□□□□ -1.29
RNF40O75150 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF40O75150 RNU6-307P-201ENST00000516743 106 ntBASIC6.98□□□□□ -1.29
RNF40O75150 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF40O75150 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF40O75150 IGLV3-6-201ENST00000523937 250 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.98□□□□□ -1.29
RNF40O75150 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF40O75150 SETP2-201ENST00000553886 926 ntBASIC6.98□□□□□ -1.29
RNF40O75150 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
RNF40O75150 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF40O75150 AL499605.1-201ENST00000604628 403 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AC004241.2-201ENST00000614562 444 ntBASIC6.98□□□□□ -1.29
RNF40O75150 U1.41-201ENST00000617626 165 ntBASIC6.98□□□□□ -1.29
RNF40O75150 MIR6778-201ENST00000617912 73 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AL138825.1-201ENST00000618587 192 ntBASIC6.98□□□□□ -1.29
RNF40O75150 AL355480.1-201ENST00000629041 99 ntBASIC6.98□□□□□ -1.29
RNF40O75150 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RNF40O75150 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RNF40O75150 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RNF40O75150 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF40O75150 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF40O75150 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF40O75150 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF40O75150 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RNF40O75150 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RNF40O75150 OFD1P17-201ENST00000437639 3018 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms