Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.87□□□□□ -1.79
LMX1BO60663 AC005539.1-201ENST00000443768 1479 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMX1BO60663 MTND5P24-201ENST00000438892 1767 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
LMX1BO60663 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.87□□□□□ -1.79
LMX1BO60663 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMX1BO60663 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMX1BO60663 RNU1-94P-201ENST00000362627 173 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 U3.4-201ENST00000363352 213 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 RNA5SP22-201ENST00000365393 109 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.87□□□□□ -1.79
LMX1BO60663 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 RPL7P8-201ENST00000411964 730 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 RPS20P14-201ENST00000412545 360 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 OR51A3P-201ENST00000413596 924 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 AC004022.2-201ENST00000413824 193 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 SNRPFP1-201ENST00000414761 252 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.87□□□□□ -1.79
LMX1BO60663 SKP1P3-201ENST00000429280 487 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 AC092809.1-201ENST00000441469 474 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 TRIM60P18-201ENST00000441518 828 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 RPL23AP43-201ENST00000446445 471 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 AC012671.1-201ENST00000451912 203 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 DDX39BP2-208ENST00000453923 258 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 AC079804.1-201ENST00000461922 436 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 RPS27AP17-201ENST00000463344 455 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 VPS26AP1-201ENST00000483197 979 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 AC104687.1-201ENST00000485829 412 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LMX1BO60663 DSTNP2-201ENST00000504533 515 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.87□□□□□ -1.79
LMX1BO60663 CBX3P3-201ENST00000508108 532 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 AC079140.3-201ENST00000511111 550 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 MTCO1P35-201ENST00000515270 228 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.87□□□□□ -1.79
LMX1BO60663 RNU6-720P-201ENST00000516363 108 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 AC106038.2-201ENST00000520706 568 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.87□□□□□ -1.79
LMX1BO60663 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
LMX1BO60663 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.87□□□□□ -1.79
LMX1BO60663 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LMX1BO60663 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 OR4K7P-201ENST00000580232 945 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.87□□□□□ -1.79
LMX1BO60663 BPIFA4P-203ENST00000603168 689 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 AL109618.2-201ENST00000605527 211 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.87□□□□□ -1.79
LMX1BO60663 AC145207.9-201ENST00000623802 325 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 AC007546.2-201ENST00000623996 360 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.87□□□□□ -1.79
LMX1BO60663 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.87□□□□□ -1.79
LMX1BO60663 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMX1BO60663 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
LMX1BO60663 OR14L1P-202ENST00000641545 3009 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMX1BO60663 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
LMX1BO60663 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMX1BO60663 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
LMX1BO60663 RAD17P1-201ENST00000418130 2042 ntBASIC3.87□□□□□ -1.79
LMX1BO60663 RNF6P1-201ENST00000444889 1784 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 AC104118.1-201ENST00000607625 1589 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.86□□□□□ -1.79
LMX1BO60663 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.86□□□□□ -1.79
LMX1BO60663 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LMX1BO60663 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LMX1BO60663 SNORA48.7-201ENST00000391302 135 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 DEFB108C-201ENST00000400154 252 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AL078604.1-201ENST00000404609 466 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC068533.2-201ENST00000411872 306 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.86□□□□□ -1.79
LMX1BO60663 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.86□□□□□ -1.79
LMX1BO60663 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.86□□□□□ -1.79
LMX1BO60663 AL358176.3-201ENST00000420757 454 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.86□□□□□ -1.79
LMX1BO60663 AL590103.1-201ENST00000434488 307 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.86□□□□□ -1.79
LMX1BO60663 UBE2V1P3-201ENST00000439651 417 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 CDC27P1-201ENST00000445384 715 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms