Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RNU4-89P-201ENST00000607443 133 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AP005432.2-201ENST00000608162 586 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.08□□□□□ -1.44
GRIN3BO60391 AC243773.3-201ENST00000613270 256 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AC126177.8-201ENST00000618339 1015 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GRIN3BO60391 AL034370.1-201ENST00000397254 1590 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
GRIN3BO60391 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GRIN3BO60391 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.08□□□□□ -1.44
GRIN3BO60391 AL022323.4-201ENST00000623980 13120 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
GRIN3BO60391 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GRIN3BO60391 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AC083899.1-201ENST00000454465 3819 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AC015799.1-201ENST00000622996 3122 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 SNORD46.1-201ENST00000364139 104 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 Y_RNA.813-201ENST00000364639 102 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
GRIN3BO60391 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.07□□□□□ -1.44
GRIN3BO60391 MIR554-201ENST00000384874 96 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 FCF1P10-201ENST00000407590 479 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 RPS3AP3-201ENST00000411933 242 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 AC138393.2-201ENST00000414742 246 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.07□□□□□ -1.44
GRIN3BO60391 BX323845.1-201ENST00000432417 179 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.07□□□□□ -1.44
GRIN3BO60391 RABEPKP1-201ENST00000440529 1026 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.07□□□□□ -1.44
GRIN3BO60391 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 MEMO1P3-201ENST00000459811 302 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AC092989.1-201ENST00000481235 277 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 AC097173.1-201ENST00000505862 819 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AF131216.2-201ENST00000512316 564 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 SCARNA20.4-201ENST00000516969 131 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 MRPL49P2-201ENST00000521066 465 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AC137800.2-201ENST00000574375 120 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
GRIN3BO60391 AC114781.5-201ENST00000615297 108 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 AC063943.3-201ENST00000615562 356 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 LRRC77P-213ENST00000637727 880 ntBASIC6.07□□□□□ -1.44
GRIN3BO60391 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.07□□□□□ -1.44
GRIN3BO60391 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
GRIN3BO60391 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.07□□□□□ -1.44
GRIN3BO60391 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GRIN3BO60391 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
GRIN3BO60391 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
GRIN3BO60391 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
GRIN3BO60391 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GRIN3BO60391 Y_RNA.11-201ENST00000362375 109 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 RNY4P14-201ENST00000363656 96 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 RN7SKP153-201ENST00000365026 316 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 Y_RNA.453-201ENST00000384223 109 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AL590002.1-201ENST00000406554 418 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 RNU2-41P-201ENST00000410991 178 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.06□□□□□ -1.44
GRIN3BO60391 C1DP2-201ENST00000418167 426 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 USP12PX-201ENST00000432383 1057 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 MTND4LP16-201ENST00000440828 295 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 GDI2P2-201ENST00000445131 608 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 NFU1P2-201ENST00000448700 469 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.06□□□□□ -1.44
GRIN3BO60391 RPL37P3-201ENST00000456825 293 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.06□□□□□ -1.44
GRIN3BO60391 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 SNORA18.6-201ENST00000516792 115 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.06□□□□□ -1.44
GRIN3BO60391 AC025884.1-201ENST00000556034 378 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 AC122134.1-201ENST00000565664 1104 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.06□□□□□ -1.44
GRIN3BO60391 MIR4298-201ENST00000584380 73 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.06□□□□□ -1.44
GRIN3BO60391 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms