Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.71□□□□□ -1.66
PROM1O43490 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.71□□□□□ -1.66
PROM1O43490 MIR4330-201ENST00000579077 105 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.71□□□□□ -1.66
PROM1O43490 AC005771.1-201ENST00000585581 349 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.71□□□□□ -1.66
PROM1O43490 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.71□□□□□ -1.66
PROM1O43490 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 AL008729.2-201ENST00000606393 473 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 AC090970.3-201ENST00000612566 866 ntBASIC4.71□□□□□ -1.66
PROM1O43490 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 AL353662.3-201ENST00000625131 237 ntBASIC4.71□□□□□ -1.66
PROM1O43490 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 CDRT1-208ENST00000630868 794 ntBASIC4.71□□□□□ -1.66
PROM1O43490 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
PROM1O43490 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PROM1O43490 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 AC092162.3-201ENST00000624511 1624 ntBASIC4.71□□□□□ -1.66
PROM1O43490 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.71□□□□□ -1.66
PROM1O43490 NEAT1-202ENST00000501122 22743 ntBASIC4.7□□□□□ -1.66
PROM1O43490 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.7□□□□□ -1.66
PROM1O43490 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.7□□□□□ -1.66
PROM1O43490 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM1O43490 AC007529.1-201ENST00000418574 2178 ntBASIC4.7□□□□□ -1.66
PROM1O43490 USP9YP4-201ENST00000424401 1745 ntBASIC4.7□□□□□ -1.66
PROM1O43490 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PROM1O43490 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.7□□□□□ -1.66
PROM1O43490 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.7□□□□□ -1.66
PROM1O43490 AC000123.3-201ENST00000624029 4975 ntBASIC4.7□□□□□ -1.66
PROM1O43490 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PROM1O43490 RNU6-115P-201ENST00000364310 107 ntBASIC4.7□□□□□ -1.66
PROM1O43490 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM1O43490 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PROM1O43490 BTF3P7-201ENST00000407097 488 ntBASIC4.7□□□□□ -1.66
PROM1O43490 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PROM1O43490 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.7□□□□□ -1.66
PROM1O43490 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM1O43490 AC234782.4-201ENST00000417646 1048 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM1O43490 Z97055.1-201ENST00000419730 712 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AL138785.1-201ENST00000425821 331 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM1O43490 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM1O43490 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.7□□□□□ -1.66
PROM1O43490 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM1O43490 RBMX2P4-201ENST00000441256 376 ntBASIC4.7□□□□□ -1.66
PROM1O43490 TPT1P13-201ENST00000449760 499 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AL356981.1-201ENST00000454879 684 ntBASIC4.7□□□□□ -1.66
PROM1O43490 MTCO3P38-201ENST00000468910 766 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.7□□□□□ -1.66
PROM1O43490 AC022795.1-201ENST00000473808 480 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.7□□□□□ -1.66
PROM1O43490 RNU6-506P-201ENST00000516553 94 ntBASIC4.7□□□□□ -1.66
PROM1O43490 RN7SKP147-201ENST00000517154 244 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM1O43490 IGHV3-32-201ENST00000519182 355 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.7□□□□□ -1.66
PROM1O43490 AF279873.1-201ENST00000523393 313 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PROM1O43490 EEF1B2P4-201ENST00000551398 348 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM1O43490 AC068135.2-201ENST00000569293 1028 ntBASIC4.7□□□□□ -1.66
PROM1O43490 OR4G1P-201ENST00000588632 938 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.7□□□□□ -1.66
PROM1O43490 AC027807.2-201ENST00000616099 408 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AL049794.2-201ENST00000616301 365 ntBASIC4.7□□□□□ -1.66
PROM1O43490 AC231657.1-201ENST00000624313 397 ntBASIC4.7□□□□□ -1.66
PROM1O43490 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.7□□□□□ -1.66
PROM1O43490 OR5H6-203ENST00000642105 978 ntBASIC4.7□□□□□ -1.66
PROM1O43490 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.7□□□□□ -1.66
PROM1O43490 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PROM1O43490 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PROM1O43490 AC009951.1-201ENST00000623674 2614 ntBASIC4.7□□□□□ -1.66
PROM1O43490 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.7□□□□□ -1.66
PROM1O43490 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PROM1O43490 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PROM1O43490 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.69□□□□□ -1.66
PROM1O43490 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PROM1O43490 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PROM1O43490 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PROM1O43490 SAGE2P-201ENST00000420011 2126 ntBASIC4.69□□□□□ -1.66
PROM1O43490 ZNF37BP-203ENST00000452306 1352 ntBASIC4.69□□□□□ -1.66
PROM1O43490 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PROM1O43490 OR4G2P-201ENST00000328113 903 ntBASIC4.69□□□□□ -1.66
PROM1O43490 SNORA73.1-201ENST00000363107 205 ntBASIC4.69□□□□□ -1.66
PROM1O43490 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PROM1O43490 CYB5AP4-201ENST00000396692 399 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC025750.1-201ENST00000399891 379 ntBASIC4.69□□□□□ -1.66
PROM1O43490 RNU2-6P-201ENST00000411404 190 ntBASIC4.69□□□□□ -1.66
PROM1O43490 TMBIM7P-201ENST00000418074 855 ntBASIC4.69□□□□□ -1.66
PROM1O43490 LINC00993-201ENST00000420453 540 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC009237.2-201ENST00000421358 284 ntBASIC4.69□□□□□ -1.66
PROM1O43490 ISCA1P1-201ENST00000426679 387 ntBASIC4.69□□□□□ -1.66
PROM1O43490 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PROM1O43490 DPPA2P1-201ENST00000428060 556 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AL512649.1-201ENST00000428997 581 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms