Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 RNA5SP267-201ENST00000364893 126 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 U1.1-201ENST00000384101 164 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 RNU1-89P-201ENST00000384592 164 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AL355615.1-201ENST00000406187 641 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 SNORA3C-201ENST00000408792 125 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 RN7SKP56-201ENST00000410513 331 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 RPS7P15-201ENST00000415804 584 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 TRGV6-201ENST00000417928 299 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 RPL7P53-201ENST00000421245 739 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AL158156.1-201ENST00000422509 473 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AL645931.1-201ENST00000439737 410 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 TPTE2P3-201ENST00000441562 1189 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 TPMTP4-201ENST00000450749 678 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 RPL5P24-201ENST00000463742 885 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC018635.1-201ENST00000468292 1030 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 RPS17P11-201ENST00000474297 293 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 RPS4XP6-201ENST00000477670 797 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 MTND6P6-201ENST00000478031 263 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 NIPA2P2-201ENST00000496376 1083 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC008494.2-201ENST00000514544 370 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 RNU7-143P-201ENST00000516781 65 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 SCARNA14-201ENST00000516903 136 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC007991.1-201ENST00000522680 631 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC122134.1-202ENST00000569111 1201 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AL355816.1-201ENST00000607951 118 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC006213.4-201ENST00000616184 634 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 AC123768.4-201ENST00000616244 701 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 CR392039.4-201ENST00000624968 501 ntBASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.73□□□□□ -1.81
TRABD2BA6NFA1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC009229.4-201ENST00000623854 1947 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 RNU5B-4P-201ENST00000363508 111 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 RHEBP3-201ENST00000411920 351 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC017083.1-201ENST00000428093 483 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 HMGB1P45-201ENST00000435986 653 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 RPL12P46-201ENST00000436610 195 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC009263.1-201ENST00000441193 1239 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 RPS7P5-201ENST00000441482 581 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 DNAJC19P8-201ENST00000452887 259 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 RPL21P11-201ENST00000461458 483 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC069306.1-201ENST00000507006 843 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC109458.1-201ENST00000508858 316 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 RN7SKP13-201ENST00000515933 244 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 SNORA70.14-201ENST00000516205 110 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC139103.1-201ENST00000534696 1030 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC027807.1-201ENST00000559921 996 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 AC090751.1-201ENST00000566966 267 ntBASIC3.72□□□□□ -1.81
TRABD2BA6NFA1 BNIP3P27-201ENST00000599991 412 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms