Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC002525.1-201ENST00000624392 1622 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC239868.2-201ENST00000564237 4527 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC018809.2-201ENST00000602436 3823 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 MTCO1P12-201ENST00000414273 1543 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 RNA5SP391-201ENST00000363456 119 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 RNU1-130P-201ENST00000363930 160 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.339-201ENST00000365325 102 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.459-201ENST00000384251 102 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 MIR191-201ENST00000384873 92 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 MTCYBP4-201ENST00000401524 249 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 HMGN1P24-201ENST00000412282 298 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 EZH2P1-201ENST00000431167 291 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 MTATP6P16-201ENST00000434543 526 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AL645939.3-201ENST00000435408 225 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC110602.1-201ENST00000437414 318 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 RPS7P3-201ENST00000443360 580 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 NOP56P2-201ENST00000447491 769 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 RPS29P15-201ENST00000458329 171 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 RN7SL39P-201ENST00000462264 297 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC044810.1-201ENST00000480271 711 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AL139099.1-201ENST00000497398 403 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 RNU7-51P-201ENST00000516560 62 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 RN7SKP99-201ENST00000517028 307 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC128657.1-201ENST00000549459 145 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 NF1P5-201ENST00000588287 448 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 SMIM12P1-201ENST00000603004 274 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AP001823.1-201ENST00000604056 1003 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AL390877.1-201ENST00000605704 214 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 MIR6885-201ENST00000612241 66 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 MTND4LP32-201ENST00000636111 270 ntBASIC5.09□□□□□ -1.59
SHISA3A0PJX4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHISA3A0PJX4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.09□□□□□ -1.6
SHISA3A0PJX4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
SHISA3A0PJX4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 OR9K1P-202ENST00000641111 3217 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 Z95114.1-201ENST00000624264 14574 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 AL122126.1-201ENST00000546905 1318 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 AP004607.3-201ENST00000530354 3915 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 RNA5SP110-201ENST00000362638 115 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 SNORA62.1-201ENST00000364287 154 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 RNA5SP187-201ENST00000384400 119 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 PSMA6P1-201ENST00000400275 741 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 AC245054.2-201ENST00000415639 319 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 AL133482.1-201ENST00000415988 498 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.08□□□□□ -1.6
SHISA3A0PJX4 AC069213.2-201ENST00000420238 366 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 OR2AS1P-201ENST00000427827 319 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 BRWD1P3-201ENST00000428816 390 ntBASIC5.08□□□□□ -1.6
SHISA3A0PJX4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms