Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SUMO1P3-201ENST00000439961 304 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 COX4I1P2-201ENST00000447446 547 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 NOP56P2-201ENST00000447491 769 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AL162388.1-201ENST00000450912 352 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AC022431.1-201ENST00000450941 438 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 GSTA11P-201ENST00000452866 669 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AC018645.1-201ENST00000505003 109 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AC104806.1-201ENST00000508720 308 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 HIGD1AP13-201ENST00000509878 289 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 Y_RNA.668-201ENST00000516233 93 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 RNU6-388P-201ENST00000517012 105 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 RNU6-389P-201ENST00000517048 105 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AC018442.3-201ENST00000523025 183 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 FAM60DP-201ENST00000524174 632 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AP004609.2-201ENST00000532177 190 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AL133153.1-201ENST00000557756 303 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AC005357.1-201ENST00000588399 301 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AL354984.3-201ENST00000604803 325 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 DUSP12P1-201ENST00000612874 516 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 PISRT1.1-201ENST00000616930 107 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AL136313.1-201ENST00000624804 202 ntBASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB11Q9Y5F2 CUBNP3-201ENST00000457461 1784 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 CDC27P3-201ENST00000635418 1910 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 RNU6-238P-201ENST00000363313 106 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 SNORA75.6-201ENST00000391318 127 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AP003170.5-201ENST00000397185 335 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AC114491.1-201ENST00000416095 246 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 RPL7P10-201ENST00000417407 739 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 DPH3P2-201ENST00000422618 250 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AL669831.1-202ENST00000428504 417 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 RPL12P16-201ENST00000431098 498 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 EZH2P1-201ENST00000431167 291 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 RPS24P13-201ENST00000442520 397 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 CEACAMP4-201ENST00000457676 421 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 RNU6-798P-201ENST00000516912 103 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AL133399.1-201ENST00000527476 298 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AL049779.2-201ENST00000553847 315 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AC124916.2-201ENST00000604416 224 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 FAM157A-202ENST00000615155 405 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AL590099.1-201ENST00000615276 138 ntBASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB11Q9Y5F2 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms