Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AL445183.3-201ENST00000414168 502 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 UBE2D3P3-201ENST00000426992 425 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 HMGB1P12-201ENST00000438594 598 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC083863.1-201ENST00000438811 231 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 HMGB1P37-201ENST00000439613 609 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 HMGB1P38-201ENST00000490557 577 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC005798.1-201ENST00000513715 387 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 MIR2116-201ENST00000517221 80 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 ARL2BPP5-201ENST00000523141 481 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC113368.1-201ENST00000603736 382 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 MIR486-1-201ENST00000612171 68 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC020923.1-201ENST00000624021 917 ntBASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNA9Q9UGM1 AF127577.6-201ENST00000623352 2191 ntBASIC3.59□□□□□ -1.84
CHRNA9Q9UGM1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CHRNA9Q9UGM1 AP002001.2-201ENST00000529025 1469 ntBASIC3.59□□□□□ -1.84
CHRNA9Q9UGM1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 SPRR2C-201ENST00000290702 219 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 RNA5SP322-201ENST00000363617 119 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 RNU1-13P-201ENST00000384499 162 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 MT-TC-201ENST00000387405 66 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 MTCO3P31-201ENST00000405526 789 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 RNU2-71P-201ENST00000411395 189 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 DEFB130D-201ENST00000426866 237 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC017083.1-201ENST00000428093 483 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 RPS26P30-201ENST00000443431 335 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC044797.1-201ENST00000445744 679 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC239367.2-201ENST00000447309 705 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 OR51B8P-201ENST00000449892 769 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 CFTRP1-201ENST00000456646 183 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 NCOR1P1-202ENST00000486162 291 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC118282.2-201ENST00000508739 374 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC010342.1-201ENST00000514047 877 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 RNA5SP179-201ENST00000517284 121 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AP001207.1-201ENST00000524051 481 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AL136520.1-202ENST00000555494 763 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC020914.4-201ENST00000597690 277 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC103881.1-201ENST00000603476 538 ntBASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA9Q9UGM1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 RNU6-328P-201ENST00000390887 106 ntBASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 RN7SKP56-201ENST00000410513 331 ntBASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 MTND2P16-201ENST00000419987 799 ntBASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 AC006548.1-201ENST00000427470 102 ntBASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 AC114973.1-201ENST00000429057 632 ntBASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 IFNNP1-201ENST00000429219 553 ntBASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 TBCAP1-201ENST00000436520 327 ntBASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 HSFY6P-201ENST00000445573 403 ntBASIC3.57□□□□□ -1.84
CHRNA9Q9UGM1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms