Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.03□□□□□ -1.92
CHD7Q9P2D1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
CHD7Q9P2D1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
CHD7Q9P2D1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHD7Q9P2D1 AC063923.1-201ENST00000478982 1619 ntBASIC3.03□□□□□ -1.92
CHD7Q9P2D1 ATF1P1-201ENST00000406040 927 ntBASIC3.03□□□□□ -1.93
CHD7Q9P2D1 RN7SKP223-201ENST00000410582 62 ntBASIC3.03□□□□□ -1.93
CHD7Q9P2D1 AC117434.1-201ENST00000419971 836 ntBASIC3.03□□□□□ -1.93
CHD7Q9P2D1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CHD7Q9P2D1 AC132942.1-201ENST00000486753 483 ntBASIC3.03□□□□□ -1.93
CHD7Q9P2D1 AC018797.3-201ENST00000513388 1241 ntBASIC3.03□□□□□ -1.93
CHD7Q9P2D1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.03□□□□□ -1.93
CHD7Q9P2D1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.03□□□□□ -1.93
CHD7Q9P2D1 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CHD7Q9P2D1 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 AC004972.1-201ENST00000623934 2209 ntBASIC3.02□□□□□ -1.93
CHD7Q9P2D1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 AC090525.1-201ENST00000479116 478 ntBASIC3.02□□□□□ -1.93
CHD7Q9P2D1 AC026782.2-201ENST00000510845 636 ntBASIC3.02□□□□□ -1.93
CHD7Q9P2D1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.02□□□□□ -1.93
CHD7Q9P2D1 AC005332.5-201ENST00000591222 2919 ntBASIC3.02□□□□□ -1.93
CHD7Q9P2D1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 RPL7P25-201ENST00000404151 721 ntBASIC3.01□□□□□ -1.93
CHD7Q9P2D1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 AC012123.2-201ENST00000485809 248 ntBASIC3.01□□□□□ -1.93
CHD7Q9P2D1 EEF1A1P37-201ENST00000522748 715 ntBASIC3.01□□□□□ -1.93
CHD7Q9P2D1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 AL356057.3-201ENST00000402607 340 ntBASIC3.01□□□□□ -1.93
CHD7Q9P2D1 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 AC005351.1-201ENST00000511152 786 ntBASIC3.01□□□□□ -1.93
CHD7Q9P2D1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHD7Q9P2D1 U8.2-201ENST00000363156 134 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3□□□□□ -1.93
CHD7Q9P2D1 WASF1P1-201ENST00000447560 1131 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 KLHL2P1-201ENST00000508691 521 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 RNA5SP148-201ENST00000516527 94 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3□□□□□ -1.93
CHD7Q9P2D1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3□□□□□ -1.93
CHD7Q9P2D1 AL158827.2-201ENST00000602494 330 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 AL691447.3-201ENST00000635020 330 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 AL049555.1-201ENST00000562834 1933 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHD7Q9P2D1 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3□□□□□ -1.93
CHD7Q9P2D1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3□□□□□ -1.93
CHD7Q9P2D1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3□□□□□ -1.93
CHD7Q9P2D1 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3□□□□□ -1.93
CHD7Q9P2D1 SYT14P1-201ENST00000481459 721 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 IGKV2-36-201ENST00000519999 223 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3□□□□□ -1.93
CHD7Q9P2D1 AC025811.1-201ENST00000604312 472 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3□□□□□ -1.93
CHD7Q9P2D1 FAM133CP-201ENST00000332869 704 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 AC105402.1-201ENST00000413336 545 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 UBE2D3P1-201ENST00000436669 444 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHD7Q9P2D1 AC138627.1-204ENST00000641894 765 ntBASIC3□□□□□ -1.93
CHD7Q9P2D1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 AP001025.2-201ENST00000490908 477 ntBASIC2.99□□□□□ -1.93
CHD7Q9P2D1 RN7SKP31-201ENST00000516354 278 ntBASIC2.99□□□□□ -1.93
CHD7Q9P2D1 RN7SKP244-201ENST00000516513 307 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms