Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 RNY3P10-201ENST00000384764 102 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 SNRPEP2-201ENST00000397592 279 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VTA1Q9NP79 Z98745.1-201ENST00000402553 494 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC007899.1-201ENST00000412776 775 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 MTCO2P34-201ENST00000421994 607 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AL589823.1-201ENST00000429577 183 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 RPL23AP74-201ENST00000437246 471 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AL592447.1-201ENST00000447592 540 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 ST13P20-201ENST00000447996 1065 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 SNRPGP9-201ENST00000456025 225 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 ARPC3P2-201ENST00000457786 533 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC103987.1-201ENST00000473394 348 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC087879.1-201ENST00000474343 374 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 NIP7P2-201ENST00000485801 544 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC025164.1-201ENST00000496249 478 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC093840.1-201ENST00000511599 336 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC104057.1-201ENST00000515547 497 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC008127.2-201ENST00000549925 1075 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC005951.1-201ENST00000576706 485 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 MIR4716-201ENST00000579628 84 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC068790.6-201ENST00000602558 258 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC115286.1-201ENST00000604298 434 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AL590392.1-201ENST00000604960 446 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AL159169.3-201ENST00000608871 561 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 MLECP1-201ENST00000615893 709 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AC026585.1-201ENST00000619582 524 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AL356266.1-201ENST00000623311 483 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 AP000648.2-201ENST00000624182 404 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 MIR6830-201ENST00000636015 70 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VTA1Q9NP79 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VTA1Q9NP79 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTA1Q9NP79 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTA1Q9NP79 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTA1Q9NP79 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AL031119.1-201ENST00000404707 1879 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 RNU6-660P-201ENST00000364566 109 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 OR5H15-201ENST00000383696 930 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 PGBD4P8-201ENST00000412993 562 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AL389915.1-201ENST00000422463 466 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 CEACAMP1-201ENST00000434624 1035 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 MTCO1P19-201ENST00000443487 500 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 SUMO2P2-201ENST00000456482 255 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 FAM172BP-201ENST00000487497 1089 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC021678.1-201ENST00000505195 936 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC004069.2-201ENST00000505438 1114 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC093809.1-201ENST00000509155 340 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AL391156.1-201ENST00000554965 554 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC068831.4-201ENST00000556118 109 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AL139286.2-201ENST00000606838 396 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC103591.3-201ENST00000608684 209 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC100793.4-201ENST00000613683 429 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC009704.2-201ENST00000618739 483 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC092192.1-201ENST00000633154 1018 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 AC084035.1-201ENST00000634543 607 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms