Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.69□□□□□ -1.66
SCAPERQ9BY12 AC087468.1-201ENST00000604365 630 ntBASIC4.69□□□□□ -1.66
SCAPERQ9BY12 AC009948.4-201ENST00000604692 675 ntBASIC4.69□□□□□ -1.66
SCAPERQ9BY12 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCAPERQ9BY12 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.68□□□□□ -1.66
SCAPERQ9BY12 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.68□□□□□ -1.66
SCAPERQ9BY12 AC073325.2-201ENST00000339545 159 ntBASIC4.68□□□□□ -1.66
SCAPERQ9BY12 SNORD15B-201ENST00000384714 146 ntBASIC4.68□□□□□ -1.66
SCAPERQ9BY12 AC073136.2-201ENST00000417282 849 ntBASIC4.68□□□□□ -1.66
SCAPERQ9BY12 AC011242.1-201ENST00000433596 1158 ntBASIC4.68□□□□□ -1.66
SCAPERQ9BY12 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.68□□□□□ -1.66
SCAPERQ9BY12 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCAPERQ9BY12 ARL2BPP6-201ENST00000512757 439 ntBASIC4.68□□□□□ -1.66
SCAPERQ9BY12 PDCD5P1-201ENST00000543528 309 ntBASIC4.68□□□□□ -1.66
SCAPERQ9BY12 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 SPATA2P1-201ENST00000431223 2055 ntBASIC4.67□□□□□ -1.66
SCAPERQ9BY12 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 MIR22-201ENST00000362190 85 ntBASIC4.67□□□□□ -1.66
SCAPERQ9BY12 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 SNORA18.3-201ENST00000384122 132 ntBASIC4.67□□□□□ -1.66
SCAPERQ9BY12 RPL6P21-201ENST00000418672 846 ntBASIC4.67□□□□□ -1.66
SCAPERQ9BY12 RPS24P13-201ENST00000442520 397 ntBASIC4.67□□□□□ -1.66
SCAPERQ9BY12 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.67□□□□□ -1.66
SCAPERQ9BY12 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 COX6CP8-201ENST00000522620 226 ntBASIC4.67□□□□□ -1.66
SCAPERQ9BY12 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 AC018552.3-201ENST00000567416 561 ntBASIC4.67□□□□□ -1.66
SCAPERQ9BY12 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SCAPERQ9BY12 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 SNORA68.2-201ENST00000391263 128 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 AL031679.1-201ENST00000400616 525 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 MIR1183-201ENST00000408856 89 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 AC127526.1-201ENST00000417526 366 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 BTF3P9-201ENST00000418784 283 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 AL121890.1-201ENST00000435457 205 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 TRBV8-2-201ENST00000475637 270 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 AC010306.1-201ENST00000523223 1117 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 AC138393.1-206ENST00000540997 1886 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 AC007390.2-201ENST00000606229 3803 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 AL132656.3-201ENST00000606384 1595 ntBASIC4.66□□□□□ -1.66
SCAPERQ9BY12 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SCAPERQ9BY12 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 DDX18P3-201ENST00000404856 2007 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 AC108734.1-201ENST00000439549 399 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 BX276092.4-201ENST00000452056 248 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 PRDX3P4-201ENST00000470828 747 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 HMGB1P3-201ENST00000502802 616 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 RPL7L1P13-201ENST00000511702 739 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 COX6B1P6-201ENST00000522347 255 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 AC091544.4-201ENST00000555268 342 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 CYCSP39-201ENST00000565821 309 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 AC067852.4-201ENST00000590314 478 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.65□□□□□ -1.66
SCAPERQ9BY12 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SCAPERQ9BY12 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SCAPERQ9BY12 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCAPERQ9BY12 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.64□□□□□ -1.67
SCAPERQ9BY12 AC126389.1-201ENST00000477436 290 ntBASIC4.64□□□□□ -1.67
SCAPERQ9BY12 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.64□□□□□ -1.67
SCAPERQ9BY12 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SCAPERQ9BY12 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCAPERQ9BY12 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SCAPERQ9BY12 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.64□□□□□ -1.67
SCAPERQ9BY12 AC104297.1-201ENST00000393779 870 ntBASIC4.63□□□□□ -1.67
SCAPERQ9BY12 AL645937.1-202ENST00000421799 937 ntBASIC4.63□□□□□ -1.67
SCAPERQ9BY12 AL513174.1-201ENST00000423182 629 ntBASIC4.63□□□□□ -1.67
SCAPERQ9BY12 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.63□□□□□ -1.67
SCAPERQ9BY12 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCAPERQ9BY12 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.63□□□□□ -1.67
SCAPERQ9BY12 RPS4XP22-201ENST00000480755 780 ntBASIC4.63□□□□□ -1.67
SCAPERQ9BY12 RPL7P47-201ENST00000497299 556 ntBASIC4.63□□□□□ -1.67
SCAPERQ9BY12 RPS26P24-201ENST00000497656 331 ntBASIC4.63□□□□□ -1.67
SCAPERQ9BY12 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms