Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 RN7SKP227-201ENST00000364445 330 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.274-201ENST00000364714 101 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 MT-TP-201ENST00000387461 68 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC110754.1-201ENST00000399740 601 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 RNU2-29P-201ENST00000410423 189 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 RNU2-28P-201ENST00000410457 189 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 PRELID3BP11-201ENST00000414230 479 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 RPS20P32-201ENST00000456044 356 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 HMGB3P30-201ENST00000457863 606 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 RPS29P15-201ENST00000458329 171 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 RN7SL51P-201ENST00000468230 285 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 SNRPCP2-201ENST00000504370 475 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC010343.2-201ENST00000510162 224 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.708-201ENST00000516950 96 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.715-201ENST00000517082 110 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 IGHV3-57-201ENST00000520143 280 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 HMGB2P1-201ENST00000591146 634 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 uc_338.34-201ENST00000617467 174 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC010624.4-201ENST00000597606 1351 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 PARP4P2-201ENST00000446672 3326 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.297-201ENST00000364950 91 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RNU6-338P-201ENST00000383888 105 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RNU6-1140P-201ENST00000410517 106 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RNU2-71P-201ENST00000411395 189 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RAC1P3-201ENST00000416129 580 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AC137499.1-201ENST00000427602 88 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AL451139.1-201ENST00000434718 346 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 SALL1P1-201ENST00000438101 3837 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AL353752.1-201ENST00000454946 260 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RPS23P3-201ENST00000470993 430 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RPL7AP10-201ENST00000481016 791 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AC034222.1-201ENST00000494052 532 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RN7SL591P-201ENST00000496150 292 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RN7SKP21-201ENST00000516503 220 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 SCARNA13-201ENST00000516672 275 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 HIGD1AP6-201ENST00000521833 279 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AC012433.1-201ENST00000588916 398 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AL355365.1-201ENST00000616480 294 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AC023509.5-201ENST00000617434 807 ntBASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms