Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 MTND4LP20-201ENST00000402379 270 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 RPL31P12-201ENST00000422587 358 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 DUTP6-201ENST00000425573 462 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 MTCO1P51-201ENST00000427672 1060 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 HMGB3P10-201ENST00000434734 572 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AC107918.3-201ENST00000533272 382 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 RPL7P26-201ENST00000333817 754 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 RPS7P13-201ENST00000413955 498 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 RPS12P23-201ENST00000419579 400 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AC108078.3-201ENST00000502633 489 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 FABP5P12-201ENST00000515543 389 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 AC139713.2-210ENST00000641741 992 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 ASNSP1-201ENST00000518311 1939 ntBASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP2Q96SN8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 RNU6-178P-201ENST00000384631 104 ntBASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 RPS6P12-201ENST00000432491 726 ntBASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 AC069540.1-201ENST00000446320 988 ntBASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 RNU7-157P-201ENST00000459600 66 ntBASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 VN1R90P-201ENST00000595717 726 ntBASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 AC006023.1-201ENST00000603944 259 ntBASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 AC090971.4-201ENST00000560291 1800 ntBASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 RLIMP2-201ENST00000427891 1563 ntBASIC3.61□□□□□ -1.83
CDK5RAP2Q96SN8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 MIR22-201ENST00000362190 85 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 RNU1-87P-201ENST00000363727 170 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 RN7SKP220-201ENST00000410611 288 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 RPL30P2-201ENST00000414021 291 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AC107083.1-201ENST00000439643 279 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 GTF3AP2-201ENST00000557014 266 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 CD24P2-201ENST00000565486 219 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AC010653.1-201ENST00000571108 881 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AC024153.1-201ENST00000603103 365 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AC004825.2-201ENST00000616634 455 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 CYCSP41-201ENST00000616920 296 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 SNORA80A-201ENST00000363922 136 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 RPL7P25-201ENST00000404151 721 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 SSR1P1-201ENST00000407630 814 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AL135938.1-201ENST00000443141 297 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 RPS17P11-201ENST00000474297 293 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 MTCYBP19-201ENST00000517463 1124 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AC113192.3-201ENST00000529152 742 ntBASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP2Q96SN8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 SNORA9.2-201ENST00000365361 133 ntBASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 RPS27AP1-201ENST00000475545 471 ntBASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 AC034159.1-201ENST00000513885 583 ntBASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 HIGD1AP3-201ENST00000515857 278 ntBASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 AC009812.2-201ENST00000517657 457 ntBASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 ATP1B3P1-201ENST00000605365 821 ntBASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 AC099506.2-201ENST00000623074 221 ntBASIC3.59□□□□□ -1.83
CDK5RAP2Q96SN8 AC015813.6-201ENST00000624409 5808 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms