Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TOPBP1Q92547 AC008549.1-201ENST00000512900 643 ntBASIC4.95□□□□□ -1.62
TOPBP1Q92547 RNU1-143P-201ENST00000516296 146 ntBASIC4.95□□□□□ -1.62
TOPBP1Q92547 AC109329.2-201ENST00000519658 482 ntBASIC4.95□□□□□ -1.62
TOPBP1Q92547 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 AC011270.1-201ENST00000558606 583 ntBASIC4.95□□□□□ -1.62
TOPBP1Q92547 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 U1.23-201ENST00000610293 146 ntBASIC4.95□□□□□ -1.62
TOPBP1Q92547 RNU1-68P-201ENST00000615382 146 ntBASIC4.95□□□□□ -1.62
TOPBP1Q92547 AP004607.9-201ENST00000618202 316 ntBASIC4.95□□□□□ -1.62
TOPBP1Q92547 U1.39-201ENST00000621562 146 ntBASIC4.95□□□□□ -1.62
TOPBP1Q92547 AC006840.1-201ENST00000623069 542 ntBASIC4.95□□□□□ -1.62
TOPBP1Q92547 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
TOPBP1Q92547 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TOPBP1Q92547 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.94□□□□□ -1.62
TOPBP1Q92547 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOPBP1Q92547 ELF2P3-201ENST00000445099 1506 ntBASIC4.94□□□□□ -1.62
TOPBP1Q92547 MIR448-201ENST00000362131 111 ntBASIC4.94□□□□□ -1.62
TOPBP1Q92547 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.94□□□□□ -1.62
TOPBP1Q92547 MTCO3P16-201ENST00000454456 754 ntBASIC4.94□□□□□ -1.62
TOPBP1Q92547 RN7SL20P-201ENST00000488827 297 ntBASIC4.94□□□□□ -1.62
TOPBP1Q92547 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
TOPBP1Q92547 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.94□□□□□ -1.62
TOPBP1Q92547 AC006272.2-201ENST00000594725 163 ntBASIC4.94□□□□□ -1.62
TOPBP1Q92547 AC079089.3-201ENST00000603094 673 ntBASIC4.94□□□□□ -1.62
TOPBP1Q92547 AC244205.2-202ENST00000635781 342 ntBASIC4.94□□□□□ -1.62
TOPBP1Q92547 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOPBP1Q92547 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
TOPBP1Q92547 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.94□□□□□ -1.62
TOPBP1Q92547 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOPBP1Q92547 SETP15-201ENST00000412724 337 ntBASIC4.93□□□□□ -1.62
TOPBP1Q92547 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.93□□□□□ -1.62
TOPBP1Q92547 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.93□□□□□ -1.62
TOPBP1Q92547 SCGB1D5P-201ENST00000515134 247 ntBASIC4.93□□□□□ -1.62
TOPBP1Q92547 SETP1-201ENST00000556014 845 ntBASIC4.93□□□□□ -1.62
TOPBP1Q92547 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.93□□□□□ -1.62
TOPBP1Q92547 AC026790.2-201ENST00000606282 430 ntBASIC4.93□□□□□ -1.62
TOPBP1Q92547 AC007318.2-201ENST00000620999 243 ntBASIC4.93□□□□□ -1.62
TOPBP1Q92547 AC017002.4-201ENST00000604721 1525 ntBASIC4.93□□□□□ -1.62
TOPBP1Q92547 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TOPBP1Q92547 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TOPBP1Q92547 AC110754.1-201ENST00000399740 601 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 RPS20P32-201ENST00000456044 356 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TOPBP1Q92547 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.92□□□□□ -1.62
TOPBP1Q92547 VN1R78P-201ENST00000597393 564 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 MIR7843-201ENST00000622274 79 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.92□□□□□ -1.62
TOPBP1Q92547 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TOPBP1Q92547 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TOPBP1Q92547 AC046144.1-201ENST00000478559 1853 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TOPBP1Q92547 AP002088.1-201ENST00000382740 395 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 AC003685.2-201ENST00000422795 395 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.92□□□□□ -1.62
TOPBP1Q92547 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.92□□□□□ -1.62
TOPBP1Q92547 SYT14P1-201ENST00000481459 721 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 ATP5F1P7-201ENST00000567330 760 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.92□□□□□ -1.62
TOPBP1Q92547 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.92□□□□□ -1.62
TOPBP1Q92547 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.92□□□□□ -1.62
TOPBP1Q92547 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.92□□□□□ -1.62
TOPBP1Q92547 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.92□□□□□ -1.62
TOPBP1Q92547 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TOPBP1Q92547 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TOPBP1Q92547 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.91□□□□□ -1.62
TOPBP1Q92547 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TOPBP1Q92547 RNA5SP293-201ENST00000410527 113 ntBASIC4.91□□□□□ -1.62
TOPBP1Q92547 AP000936.2-201ENST00000447151 681 ntBASIC4.91□□□□□ -1.62
TOPBP1Q92547 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.91□□□□□ -1.62
TOPBP1Q92547 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.91□□□□□ -1.62
TOPBP1Q92547 RNA5SP24-201ENST00000516478 95 ntBASIC4.91□□□□□ -1.62
TOPBP1Q92547 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TOPBP1Q92547 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.91□□□□□ -1.62
TOPBP1Q92547 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TOPBP1Q92547 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TOPBP1Q92547 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TOPBP1Q92547 RNA5SP508-201ENST00000411327 119 ntBASIC4.9□□□□□ -1.63
TOPBP1Q92547 RPL7L1P1-201ENST00000448259 785 ntBASIC4.9□□□□□ -1.63
TOPBP1Q92547 AL365400.2-201ENST00000605604 902 ntBASIC4.9□□□□□ -1.63
TOPBP1Q92547 AC244517.3-201ENST00000616254 1235 ntBASIC4.9□□□□□ -1.63
TOPBP1Q92547 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TOPBP1Q92547 AL356489.2-201ENST00000566968 3528 ntBASIC4.9□□□□□ -1.63
TOPBP1Q92547 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.9□□□□□ -1.63
TOPBP1Q92547 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TOPBP1Q92547 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TOPBP1Q92547 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
TOPBP1Q92547 RNU1-112P-201ENST00000364401 164 ntBASIC4.89□□□□□ -1.63
TOPBP1Q92547 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TOPBP1Q92547 RPL5P16-201ENST00000471467 790 ntBASIC4.89□□□□□ -1.63
TOPBP1Q92547 AP002884.2-201ENST00000471647 395 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms