Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 TMX2P1-201ENST00000436507 708 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 EEF1E1P1-201ENST00000446998 430 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 WASF1P1-201ENST00000447560 1131 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 RPL23AP35-201ENST00000451906 501 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC239798.3-201ENST00000454459 408 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 RN7SL517P-201ENST00000462240 305 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 OR4G11P-201ENST00000492842 939 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC093281.2-201ENST00000510153 597 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 RNU6-709P-201ENST00000517257 104 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC109635.6-201ENST00000525487 1113 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 CYCSP29-201ENST00000533731 318 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC008083.2-201ENST00000546707 476 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC006349.1-201ENST00000555526 235 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 PSMB7P1-201ENST00000556349 514 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 ZNF519P2-201ENST00000557032 169 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 NPM1P47-201ENST00000560843 856 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC093249.4-201ENST00000564755 259 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC072046.2-201ENST00000618366 268 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AL445567.2-201ENST00000618935 498 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A3Q8N4M1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A3Q8N4M1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.84□□□□□ -1.64
SLC44A3Q8N4M1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.84□□□□□ -1.64
SLC44A3Q8N4M1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A3Q8N4M1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A3Q8N4M1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A3Q8N4M1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.84□□□□□ -1.64
SLC44A3Q8N4M1 MTND5P26-201ENST00000426018 1752 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 CR383658.2-201ENST00000547576 1525 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 SMG1P4-204ENST00000523028 4131 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 RNU6-1042P-201ENST00000384204 107 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC114814.2-201ENST00000419195 485 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 USP9YP18-201ENST00000425912 695 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 MTND3P21-201ENST00000433774 331 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AL359073.1-201ENST00000448036 403 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC104306.1-201ENST00000449702 371 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC108463.1-201ENST00000450258 347 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC245028.2-201ENST00000458673 253 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 RPL21P126-201ENST00000470049 478 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC104687.1-201ENST00000485829 412 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 RPL7P38-201ENST00000488396 739 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 RNU6-718P-201ENST00000516166 105 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 SNORA31.9-201ENST00000516429 84 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 RNU6-506P-201ENST00000516553 94 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC008802.1-201ENST00000519121 791 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 OR5AK1P-201ENST00000524837 922 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 SNORA59B-202ENST00000578183 701 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 BPTFP1-201ENST00000579209 492 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 MIR4472-2-201ENST00000582069 67 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 BX005214.3-202ENST00000619809 325 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AC008785.1-201ENST00000624475 456 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 AP003400.5-201ENST00000624827 617 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms