Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
RIF1Q5UIP0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RIF1Q5UIP0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RIF1Q5UIP0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RIF1Q5UIP0 HMGB3P12-201ENST00000438745 556 ntBASIC2.93□□□□□ -1.94
RIF1Q5UIP0 RN7SKP209-201ENST00000516888 304 ntBASIC2.93□□□□□ -1.94
RIF1Q5UIP0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
RIF1Q5UIP0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.93□□□□□ -1.94
RIF1Q5UIP0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.93□□□□□ -1.94
RIF1Q5UIP0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RIF1Q5UIP0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
RIF1Q5UIP0 AC108206.1-201ENST00000570186 4159 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 MIR489-201ENST00000384923 84 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 MIR513A2-201ENST00000385249 127 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 NPM1P37-201ENST00000403105 874 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 RNU4-53P-201ENST00000410828 140 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC2.92□□□□□ -1.94
RIF1Q5UIP0 MTCO1P39-201ENST00000426148 480 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 MORF4L2P1-201ENST00000503761 858 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 USP9YP2-201ENST00000504503 1000 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 USP9YP1-201ENST00000513521 1002 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC009948.4-201ENST00000604692 675 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 LSM1P2-201ENST00000604911 322 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 GMCL1P2-201ENST00000605230 823 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC099063.3-201ENST00000642066 185 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC080128.1-201ENST00000474389 1917 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.92□□□□□ -1.94
RIF1Q5UIP0 RNA5SP425-201ENST00000410336 112 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC104687.1-201ENST00000485829 412 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC111000.2-201ENST00000507775 550 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AL442163.2-201ENST00000553912 710 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 AC092184.1-201ENST00000625042 715 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 ZNF658B-202ENST00000615961 3375 ntBASIC2.92□□□□□ -1.94
RIF1Q5UIP0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.92□□□□□ -1.94
RIF1Q5UIP0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AL513302.2-201ENST00000562313 1842 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 RPL23AP36-201ENST00000413895 458 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC048351.1-201ENST00000420064 602 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC012123.2-201ENST00000485809 248 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC113430.1-201ENST00000506872 718 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC005798.1-201ENST00000513715 387 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC123768.4-201ENST00000616244 701 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC138965.3-201ENST00000623875 498 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 RNA5SP99-201ENST00000364020 114 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 MIR7-2-201ENST00000384970 110 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AL590290.1-201ENST00000405336 380 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC092809.1-201ENST00000441469 474 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AL662791.1-201ENST00000441992 928 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RIF1Q5UIP0 OR11H5P-201ENST00000554039 926 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 DNAJC19P3-201ENST00000594491 331 ntBASIC2.91□□□□□ -1.94
RIF1Q5UIP0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
RIF1Q5UIP0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RIF1Q5UIP0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
RIF1Q5UIP0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.9□□□□□ -1.94
RIF1Q5UIP0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC2.9□□□□□ -1.94
RIF1Q5UIP0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 AL645937.1-202ENST00000421799 937 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 HMGN2P3-201ENST00000433603 273 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 HMGN2P5-201ENST00000436882 273 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 AC005921.1-201ENST00000510589 286 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 RN7SKP283-201ENST00000517197 270 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 AADACP1-206ENST00000561502 1193 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 AC003985.2-201ENST00000562268 1669 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 Y_RNA.118-201ENST00000363300 101 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 RPS3AP26-201ENST00000398259 784 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 YWHAQP9-201ENST00000445891 512 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 SNRPGP5-201ENST00000456003 220 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 AC010468.1-201ENST00000461022 817 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 RPL9P32-201ENST00000464118 620 ntBASIC2.9□□□□□ -1.95
RIF1Q5UIP0 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RIF1Q5UIP0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms