Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 RNU6-903P-201ENST00000391270 109 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 RNU6-735P-201ENST00000410612 107 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 U3.43-201ENST00000410734 213 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 OR4K11P-201ENST00000431829 904 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 UBE2V1P5-201ENST00000440070 405 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AP006222.1-205ENST00000450734 457 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC002553.3-201ENST00000453002 341 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC133473.1-201ENST00000455173 299 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 RNU7-136P-201ENST00000458819 69 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC092824.1-201ENST00000483524 576 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 RN7SL193P-201ENST00000491708 276 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC083906.1-201ENST00000509298 406 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC114781.3-201ENST00000512083 142 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 RNU6-475P-201ENST00000516073 104 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 RNU6-1016P-201ENST00000516689 94 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC079600.1-201ENST00000550326 297 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC092121.1-201ENST00000569452 202 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 OR4K8P-201ENST00000578842 1048 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 MIR4424-201ENST00000585257 86 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AP001521.1-201ENST00000609150 300 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AL033543.1-201ENST00000623440 13454 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 DDX18P4-201ENST00000511690 1966 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 RNU6-806P-201ENST00000365147 105 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 MIR1203-201ENST00000408812 85 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 RPSAP35-201ENST00000413753 818 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 SDHDP6-201ENST00000414693 480 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC092832.1-201ENST00000422934 400 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 RPL7P28-201ENST00000437739 740 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC064862.4-201ENST00000442180 334 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC112492.4-201ENST00000456549 352 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 RPS3AP41-201ENST00000462701 778 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 RPL7L1P8-201ENST00000469911 741 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 SCARNA18.1-201ENST00000516330 83 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 RNA5SP434-201ENST00000516647 121 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 Y_RNA.715-201ENST00000517082 110 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC090312.1-201ENST00000580637 348 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 HMGB2P1-201ENST00000591146 634 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AL157899.1-201ENST00000604110 936 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC010378.1-201ENST00000619270 362 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC026634.1-201ENST00000634369 198 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AL606534.2-204ENST00000635008 178 ntBASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTC1Q2NKJ3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms