Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.1□□□□□ -1.91
USF2Q15853 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.1□□□□□ -1.91
USF2Q15853 AC073143.1-201ENST00000436316 395 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.1□□□□□ -1.91
USF2Q15853 AC068135.1-201ENST00000446164 246 ntBASIC3.1□□□□□ -1.91
USF2Q15853 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.1□□□□□ -1.91
USF2Q15853 AC008280.2-201ENST00000455473 307 ntBASIC3.1□□□□□ -1.91
USF2Q15853 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
USF2Q15853 RPL38P1-201ENST00000460914 211 ntBASIC3.1□□□□□ -1.91
USF2Q15853 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.1□□□□□ -1.91
USF2Q15853 UQCRHP4-201ENST00000471686 272 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AC091167.1-201ENST00000492017 396 ntBASIC3.1□□□□□ -1.91
USF2Q15853 RPS27AP13-201ENST00000498403 237 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.1□□□□□ -1.91
USF2Q15853 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.1□□□□□ -1.91
USF2Q15853 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.1□□□□□ -1.91
USF2Q15853 AP003385.6-201ENST00000531603 374 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.1□□□□□ -1.91
USF2Q15853 PARP1P2-201ENST00000556806 195 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.1□□□□□ -1.91
USF2Q15853 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.1□□□□□ -1.91
USF2Q15853 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.1□□□□□ -1.91
USF2Q15853 AL669831.4-202ENST00000590817 238 ntBASIC3.1□□□□□ -1.91
USF2Q15853 IPO5P1-202ENST00000600039 287 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AC135178.6-201ENST00000605314 398 ntBASIC3.1□□□□□ -1.91
USF2Q15853 CR589904.2-201ENST00000612533 440 ntBASIC3.1□□□□□ -1.91
USF2Q15853 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
USF2Q15853 AL731566.2-201ENST00000618971 317 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AC018755.4-201ENST00000619715 454 ntBASIC3.1□□□□□ -1.91
USF2Q15853 MIR6810-201ENST00000622701 70 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AC124312.6-202ENST00000623624 418 ntBASIC3.1□□□□□ -1.91
USF2Q15853 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.1□□□□□ -1.91
USF2Q15853 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.1□□□□□ -1.91
USF2Q15853 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.1□□□□□ -1.91
USF2Q15853 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
USF2Q15853 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.1□□□□□ -1.91
USF2Q15853 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
USF2Q15853 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
USF2Q15853 ZNF734P-201ENST00000419494 1534 ntBASIC3.09□□□□□ -1.91
USF2Q15853 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
USF2Q15853 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
USF2Q15853 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.09□□□□□ -1.91
USF2Q15853 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
USF2Q15853 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
USF2Q15853 SSXP10-201ENST00000402595 565 ntBASIC3.09□□□□□ -1.91
USF2Q15853 RNU6-1077P-201ENST00000410506 102 ntBASIC3.09□□□□□ -1.91
USF2Q15853 HSPE1P12-201ENST00000412576 301 ntBASIC3.09□□□□□ -1.91
USF2Q15853 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.09□□□□□ -1.91
USF2Q15853 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.09□□□□□ -1.91
USF2Q15853 AC092017.2-201ENST00000427600 362 ntBASIC3.09□□□□□ -1.91
USF2Q15853 AL445669.2-201ENST00000454425 421 ntBASIC3.09□□□□□ -1.91
USF2Q15853 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.09□□□□□ -1.91
USF2Q15853 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.09□□□□□ -1.91
USF2Q15853 ARL4AP2-201ENST00000507378 601 ntBASIC3.09□□□□□ -1.91
USF2Q15853 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
USF2Q15853 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.09□□□□□ -1.91
USF2Q15853 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
USF2Q15853 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
USF2Q15853 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.09□□□□□ -1.91
USF2Q15853 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.09□□□□□ -1.91
USF2Q15853 RNU6-202P-201ENST00000515998 96 ntBASIC3.09□□□□□ -1.91
USF2Q15853 RN7SKP282-201ENST00000516824 299 ntBASIC3.09□□□□□ -1.91
USF2Q15853 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.09□□□□□ -1.91
USF2Q15853 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.09□□□□□ -1.91
USF2Q15853 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.09□□□□□ -1.91
USF2Q15853 AL121576.1-201ENST00000556055 276 ntBASIC3.09□□□□□ -1.91
USF2Q15853 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.09□□□□□ -1.91
USF2Q15853 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
USF2Q15853 COX6CP3-201ENST00000580869 223 ntBASIC3.09□□□□□ -1.91
USF2Q15853 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.09□□□□□ -1.91
USF2Q15853 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.09□□□□□ -1.91
USF2Q15853 AC009948.4-201ENST00000604692 675 ntBASIC3.09□□□□□ -1.91
USF2Q15853 MIR8059-201ENST00000620427 81 ntBASIC3.09□□□□□ -1.91
USF2Q15853 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
USF2Q15853 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.09□□□□□ -1.91
USF2Q15853 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.09□□□□□ -1.91
USF2Q15853 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
USF2Q15853 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
USF2Q15853 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
USF2Q15853 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
USF2Q15853 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
USF2Q15853 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.08□□□□□ -1.92
USF2Q15853 SNORA70.2-201ENST00000364506 135 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AL049693.1-201ENST00000402760 611 ntBASIC3.08□□□□□ -1.92
USF2Q15853 HMGB3P19-201ENST00000403971 560 ntBASIC3.08□□□□□ -1.92
USF2Q15853 RNA5SP56-201ENST00000410277 118 ntBASIC3.08□□□□□ -1.92
USF2Q15853 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.08□□□□□ -1.92
USF2Q15853 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.08□□□□□ -1.92
USF2Q15853 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.08□□□□□ -1.92
USF2Q15853 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.08□□□□□ -1.92
USF2Q15853 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
USF2Q15853 SKP1P1-201ENST00000438081 489 ntBASIC3.08□□□□□ -1.92
USF2Q15853 RPS27P5-201ENST00000444247 244 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.08□□□□□ -1.92
USF2Q15853 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
USF2Q15853 RPL6P9-201ENST00000466502 859 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AC068724.1-201ENST00000487100 792 ntBASIC3.08□□□□□ -1.92
USF2Q15853 PRELID3BP5-201ENST00000508612 460 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms