Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RPL5P23-201ENST00000496040 868 ntBASIC3.65□□□□□ -1.83
CDH6P55285 SETP14-201ENST00000497538 873 ntBASIC3.65□□□□□ -1.83
CDH6P55285 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH6P55285 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH6P55285 RNU1-95P-201ENST00000516357 160 ntBASIC3.65□□□□□ -1.83
CDH6P55285 RNU1-128P-201ENST00000516704 160 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH6P55285 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH6P55285 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH6P55285 OR8L1P-201ENST00000534005 955 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH6P55285 GTF2IP22-201ENST00000554443 182 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH6P55285 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH6P55285 AC006116.10-201ENST00000591836 581 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH6P55285 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH6P55285 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH6P55285 AC121761.2-201ENST00000617300 689 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDH6P55285 AL162233.1-201ENST00000620014 944 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AL356863.1-201ENST00000623378 1080 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AC090617.9-201ENST00000623751 147 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AC112200.1-201ENST00000625015 234 ntBASIC3.65□□□□□ -1.83
CDH6P55285 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH6P55285 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH6P55285 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH6P55285 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDH6P55285 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CDH6P55285 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH6P55285 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CDH6P55285 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH6P55285 AC119744.1-201ENST00000454746 1715 ntBASIC3.64□□□□□ -1.83
CDH6P55285 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CDH6P55285 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH6P55285 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CDH6P55285 RNA5SP124-201ENST00000362739 110 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AL359837.1-201ENST00000381357 287 ntBASIC3.64□□□□□ -1.83
CDH6P55285 RNU6-1293P-201ENST00000384077 107 ntBASIC3.64□□□□□ -1.83
CDH6P55285 SNORA5A-201ENST00000384111 134 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH6P55285 RAB9AP3-201ENST00000412737 573 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AC127526.1-201ENST00000417526 366 ntBASIC3.64□□□□□ -1.83
CDH6P55285 RPS15AP40-201ENST00000419621 391 ntBASIC3.64□□□□□ -1.83
CDH6P55285 CYCSP4-201ENST00000429682 331 ntBASIC3.64□□□□□ -1.83
CDH6P55285 RPS26P40-201ENST00000435209 294 ntBASIC3.64□□□□□ -1.83
CDH6P55285 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH6P55285 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH6P55285 AL357552.1-201ENST00000445254 415 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AC069540.1-201ENST00000446320 988 ntBASIC3.64□□□□□ -1.83
CDH6P55285 HMGN2P21-201ENST00000447764 270 ntBASIC3.64□□□□□ -1.83
CDH6P55285 RAB9AP1-201ENST00000449393 573 ntBASIC3.64□□□□□ -1.83
CDH6P55285 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH6P55285 MTND3P4-201ENST00000453537 303 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH6P55285 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH6P55285 AP000563.1-201ENST00000490865 758 ntBASIC3.64□□□□□ -1.83
CDH6P55285 PCBP2P3-201ENST00000509726 843 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH6P55285 AC108043.1-201ENST00000512696 574 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH6P55285 RNU4-60P-201ENST00000517239 135 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH6P55285 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH6P55285 OR5AK3P-201ENST00000527486 1297 ntBASIC3.64□□□□□ -1.83
CDH6P55285 HIGD1AP10-201ENST00000527837 282 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH6P55285 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH6P55285 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH6P55285 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH6P55285 AC015802.5-201ENST00000607478 399 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AL355802.4-201ENST00000607635 548 ntBASIC3.64□□□□□ -1.83
CDH6P55285 RNVU1-4-201ENST00000612985 164 ntBASIC3.64□□□□□ -1.83
CDH6P55285 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH6P55285 RNU6-156P-201ENST00000621869 107 ntBASIC3.64□□□□□ -1.83
CDH6P55285 CR392039.5-201ENST00000623201 510 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AC034229.5-201ENST00000624258 185 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH6P55285 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH6P55285 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH6P55285 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH6P55285 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH6P55285 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH6P55285 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH6P55285 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH6P55285 PWAR6-201ENST00000552334 4618 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AL133383.2-201ENST00000622958 2336 ntBASIC3.64□□□□□ -1.83
CDH6P55285 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CDH6P55285 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH6P55285 MTND5P3-201ENST00000438536 1800 ntBASIC3.63□□□□□ -1.83
CDH6P55285 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH6P55285 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH6P55285 NSRP1P1-201ENST00000444067 1693 ntBASIC3.63□□□□□ -1.83
CDH6P55285 HMGB3P18-201ENST00000406327 590 ntBASIC3.63□□□□□ -1.83
CDH6P55285 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH6P55285 AC017079.2-201ENST00000416102 485 ntBASIC3.63□□□□□ -1.83
CDH6P55285 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH6P55285 MTND5P8-201ENST00000449817 1083 ntBASIC3.63□□□□□ -1.83
CDH6P55285 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms