Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.1□□□□□ -1.75
VCPP55072 CIR1P1-201ENST00000524055 1133 ntBASIC4.1□□□□□ -1.75
VCPP55072 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.1□□□□□ -1.75
VCPP55072 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.1□□□□□ -1.75
VCPP55072 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.1□□□□□ -1.75
VCPP55072 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.1□□□□□ -1.75
VCPP55072 AC105429.2-201ENST00000610567 517 ntBASIC4.1□□□□□ -1.75
VCPP55072 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.1□□□□□ -1.75
VCPP55072 AC097460.3-201ENST00000623099 442 ntBASIC4.1□□□□□ -1.75
VCPP55072 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.1□□□□□ -1.75
VCPP55072 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.1□□□□□ -1.75
VCPP55072 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.09□□□□□ -1.75
VCPP55072 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VCPP55072 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VCPP55072 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VCPP55072 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
VCPP55072 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VCPP55072 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VCPP55072 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.09□□□□□ -1.75
VCPP55072 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.09□□□□□ -1.75
VCPP55072 MTCO3P4-201ENST00000419236 787 ntBASIC4.09□□□□□ -1.75
VCPP55072 AL158156.1-201ENST00000422509 473 ntBASIC4.09□□□□□ -1.75
VCPP55072 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.09□□□□□ -1.75
VCPP55072 FO393419.3-201ENST00000428741 282 ntBASIC4.09□□□□□ -1.75
VCPP55072 HIGD1AP4-201ENST00000430194 280 ntBASIC4.09□□□□□ -1.75
VCPP55072 RNFT1P2-201ENST00000443064 757 ntBASIC4.09□□□□□ -1.75
VCPP55072 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.09□□□□□ -1.75
VCPP55072 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.09□□□□□ -1.75
VCPP55072 RPL9P32-201ENST00000464118 620 ntBASIC4.09□□□□□ -1.75
VCPP55072 RPL21P103-201ENST00000479921 488 ntBASIC4.09□□□□□ -1.75
VCPP55072 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.09□□□□□ -1.75
VCPP55072 AC111193.1-201ENST00000504097 155 ntBASIC4.09□□□□□ -1.75
VCPP55072 BTF3L4P4-201ENST00000506381 449 ntBASIC4.09□□□□□ -1.75
VCPP55072 AC090071.1-201ENST00000507713 644 ntBASIC4.09□□□□□ -1.75
VCPP55072 HMGN1P11-201ENST00000508668 303 ntBASIC4.09□□□□□ -1.75
VCPP55072 NDUFB4P9-201ENST00000511646 388 ntBASIC4.09□□□□□ -1.75
VCPP55072 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.09□□□□□ -1.75
VCPP55072 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.09□□□□□ -1.75
VCPP55072 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.09□□□□□ -1.75
VCPP55072 AC079880.2-201ENST00000603790 1213 ntBASIC4.09□□□□□ -1.75
VCPP55072 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VCPP55072 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.09□□□□□ -1.75
VCPP55072 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.09□□□□□ -1.75
VCPP55072 AC106730.3-201ENST00000624568 641 ntBASIC4.09□□□□□ -1.75
VCPP55072 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.09□□□□□ -1.75
VCPP55072 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VCPP55072 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
VCPP55072 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VCPP55072 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VCPP55072 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VCPP55072 OR6K3-202ENST00000368146 996 ntBASIC4.08□□□□□ -1.76
VCPP55072 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.08□□□□□ -1.76
VCPP55072 AL138878.1-201ENST00000405131 347 ntBASIC4.08□□□□□ -1.76
VCPP55072 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VCPP55072 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.08□□□□□ -1.76
VCPP55072 Z97055.1-201ENST00000419730 712 ntBASIC4.08□□□□□ -1.76
VCPP55072 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.08□□□□□ -1.76
VCPP55072 AC008065.1-201ENST00000428525 348 ntBASIC4.08□□□□□ -1.76
VCPP55072 NMD3P1-201ENST00000439704 1488 ntBASIC4.08□□□□□ -1.76
VCPP55072 RPS27P5-201ENST00000444247 244 ntBASIC4.08□□□□□ -1.76
VCPP55072 ARL5AP2-201ENST00000444698 533 ntBASIC4.08□□□□□ -1.76
VCPP55072 RPS17P13-201ENST00000448974 407 ntBASIC4.08□□□□□ -1.76
VCPP55072 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.08□□□□□ -1.76
VCPP55072 TVP23BP2-201ENST00000455082 615 ntBASIC4.08□□□□□ -1.76
VCPP55072 HMGN2P7-201ENST00000456186 273 ntBASIC4.08□□□□□ -1.76
VCPP55072 AC078857.1-201ENST00000469870 667 ntBASIC4.08□□□□□ -1.76
VCPP55072 AL136126.1-201ENST00000473603 402 ntBASIC4.08□□□□□ -1.76
VCPP55072 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.08□□□□□ -1.76
VCPP55072 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.08□□□□□ -1.76
VCPP55072 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.08□□□□□ -1.76
VCPP55072 AP002001.2-201ENST00000529025 1469 ntBASIC4.08□□□□□ -1.76
VCPP55072 OR4R2P-201ENST00000530815 597 ntBASIC4.08□□□□□ -1.76
VCPP55072 OR4C2P-201ENST00000530855 1064 ntBASIC4.08□□□□□ -1.76
VCPP55072 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VCPP55072 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VCPP55072 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.08□□□□□ -1.76
VCPP55072 YPEL5P3-201ENST00000547227 352 ntBASIC4.08□□□□□ -1.76
VCPP55072 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.08□□□□□ -1.76
VCPP55072 AC091516.1-201ENST00000549191 703 ntBASIC4.08□□□□□ -1.76
VCPP55072 POLR2KP1-201ENST00000553226 168 ntBASIC4.08□□□□□ -1.76
VCPP55072 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.08□□□□□ -1.76
VCPP55072 AC066616.2-201ENST00000559334 1481 ntBASIC4.08□□□□□ -1.76
VCPP55072 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.08□□□□□ -1.76
VCPP55072 AL137843.1-201ENST00000605078 385 ntBASIC4.08□□□□□ -1.76
VCPP55072 MAPK10-373ENST00000641983 6772 ntBASIC4.08□□□□□ -1.76
VCPP55072 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VCPP55072 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
VCPP55072 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VCPP55072 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VCPP55072 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VCPP55072 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.07□□□□□ -1.76
VCPP55072 RNU6-609P-201ENST00000365459 107 ntBASIC4.07□□□□□ -1.76
VCPP55072 RNA5SP167-201ENST00000365461 116 ntBASIC4.07□□□□□ -1.76
VCPP55072 MIR142-201ENST00000384835 87 ntBASIC4.07□□□□□ -1.76
VCPP55072 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VCPP55072 HMGB1P13-201ENST00000406019 642 ntBASIC4.07□□□□□ -1.76
VCPP55072 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms