Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4□□□□□ -1.77
HMGCS2P54868 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4□□□□□ -1.77
HMGCS2P54868 AL592494.2-201ENST00000425455 1548 ntBASIC4□□□□□ -1.77
HMGCS2P54868 AL353743.1-202ENST00000431724 1695 ntBASIC4□□□□□ -1.77
HMGCS2P54868 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS2P54868 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HMGCS2P54868 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 SNORA63.3-201ENST00000362682 132 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 TAF9BP1-201ENST00000396646 746 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 AL121834.1-202ENST00000404494 277 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 RN7SKP111-201ENST00000410349 271 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 RNU4-74P-201ENST00000411280 161 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 AC010385.1-201ENST00000412374 256 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 AL024507.1-201ENST00000412741 274 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS2P54868 AL138785.1-201ENST00000425821 331 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 DNAJC19P1-201ENST00000455312 319 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCS2P54868 MTCO2P9-201ENST00000503214 694 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC023141.12-201ENST00000512399 199 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 MIR4512-201ENST00000583257 77 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AL049844.2-201ENST00000604280 628 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 AC144521.1-201ENST00000607148 956 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 AC127502.3-201ENST00000636170 1206 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS2P54868 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCS2P54868 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS2P54868 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS2P54868 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCS2P54868 Z83843.1-201ENST00000604070 3685 ntBASIC3.99□□□□□ -1.77
HMGCS2P54868 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HMGCS2P54868 MTCO1P4-201ENST00000520516 1409 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCS2P54868 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCS2P54868 RAD1P1-201ENST00000231383 813 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 RNA5SP42-201ENST00000364278 115 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 MIR93-201ENST00000385024 80 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 LAP3P1-201ENST00000403648 294 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCS2P54868 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGCS2P54868 AL158825.1-201ENST00000414735 521 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AL158050.1-201ENST00000416077 457 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCS2P54868 IPMKP1-201ENST00000425988 855 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCS2P54868 AL512637.2-201ENST00000431287 1256 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 MRPS18BP2-201ENST00000434310 759 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCS2P54868 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCS2P54868 AC023512.1-201ENST00000444513 499 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 HMGB3P21-201ENST00000452483 547 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC084357.1-201ENST00000473404 255 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCS2P54868 SYT14P1-201ENST00000481459 721 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCS2P54868 AC107398.1-201ENST00000486904 505 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCS2P54868 AC112198.4-201ENST00000515450 351 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC092747.2-201ENST00000545069 983 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGCS2P54868 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCS2P54868 MIR4325-201ENST00000583049 90 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC067852.3-201ENST00000589177 561 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 CKS1BP3-201ENST00000600888 237 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC011816.2-201ENST00000607089 556 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCS2P54868 AC024933.1-201ENST00000608472 348 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCS2P54868 AC011472.4-201ENST00000615848 491 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC123768.4-201ENST00000616244 701 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AC243756.2-201ENST00000618406 463 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 SCARNA15.3-201ENST00000626315 122 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 SCARNA4.1-201ENST00000628597 123 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCS2P54868 NMD3P1-201ENST00000439704 1488 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AL356274.2-201ENST00000624379 3752 ntBASIC3.98□□□□□ -1.77
HMGCS2P54868 AL136520.1-201ENST00000600311 1322 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGCS2P54868 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms