Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLTCL1P53675 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLTCL1P53675 MIR449A-201ENST00000362113 91 ntBASIC4.27□□□□□ -1.73
CLTCL1P53675 XGY1-201ENST00000381172 446 ntBASIC4.27□□□□□ -1.73
CLTCL1P53675 AC110754.1-201ENST00000399740 601 ntBASIC4.27□□□□□ -1.73
CLTCL1P53675 RPS12P23-201ENST00000419579 400 ntBASIC4.27□□□□□ -1.73
CLTCL1P53675 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.27□□□□□ -1.73
CLTCL1P53675 AC108938.1-201ENST00000451204 136 ntBASIC4.27□□□□□ -1.73
CLTCL1P53675 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.27□□□□□ -1.73
CLTCL1P53675 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.27□□□□□ -1.73
CLTCL1P53675 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.27□□□□□ -1.73
CLTCL1P53675 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
CLTCL1P53675 MAPK10-373ENST00000641983 6772 ntBASIC4.27□□□□□ -1.73
CLTCL1P53675 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.26□□□□□ -1.73
CLTCL1P53675 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLTCL1P53675 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLTCL1P53675 MTCO1P24-201ENST00000515438 1558 ntBASIC4.26□□□□□ -1.73
CLTCL1P53675 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.26□□□□□ -1.73
CLTCL1P53675 ARF4P3-201ENST00000397387 509 ntBASIC4.26□□□□□ -1.73
CLTCL1P53675 U3.42-201ENST00000408746 214 ntBASIC4.26□□□□□ -1.73
CLTCL1P53675 RPL31P12-201ENST00000422587 358 ntBASIC4.26□□□□□ -1.73
CLTCL1P53675 NIPA2P5-201ENST00000452282 464 ntBASIC4.26□□□□□ -1.73
CLTCL1P53675 AC006539.3-201ENST00000454258 129 ntBASIC4.26□□□□□ -1.73
CLTCL1P53675 METTL15P1-201ENST00000481421 1045 ntBASIC4.26□□□□□ -1.73
CLTCL1P53675 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.26□□□□□ -1.73
CLTCL1P53675 RNA5SP367-201ENST00000516557 118 ntBASIC4.26□□□□□ -1.73
CLTCL1P53675 AC104027.1-201ENST00000521887 300 ntBASIC4.26□□□□□ -1.73
CLTCL1P53675 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.26□□□□□ -1.73
CLTCL1P53675 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.26□□□□□ -1.73
CLTCL1P53675 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLTCL1P53675 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CLTCL1P53675 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CLTCL1P53675 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLTCL1P53675 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.25□□□□□ -1.73
CLTCL1P53675 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLTCL1P53675 RPS7P13-201ENST00000413955 498 ntBASIC4.25□□□□□ -1.73
CLTCL1P53675 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.25□□□□□ -1.73
CLTCL1P53675 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.25□□□□□ -1.73
CLTCL1P53675 FAR1P1-201ENST00000427163 934 ntBASIC4.25□□□□□ -1.73
CLTCL1P53675 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.25□□□□□ -1.73
CLTCL1P53675 AC083906.5-201ENST00000503722 328 ntBASIC4.25□□□□□ -1.73
CLTCL1P53675 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.25□□□□□ -1.73
CLTCL1P53675 AC103881.1-201ENST00000603476 538 ntBASIC4.25□□□□□ -1.73
CLTCL1P53675 PLCE1P1-201ENST00000622094 305 ntBASIC4.25□□□□□ -1.73
CLTCL1P53675 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.25□□□□□ -1.73
CLTCL1P53675 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLTCL1P53675 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.25□□□□□ -1.73
CLTCL1P53675 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLTCL1P53675 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLTCL1P53675 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLTCL1P53675 AC092111.2-201ENST00000611627 1414 ntBASIC4.25□□□□□ -1.73
CLTCL1P53675 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLTCL1P53675 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLTCL1P53675 AL139095.1-201ENST00000404326 391 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 RNA5SP184-201ENST00000411071 108 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 GTF2IP23-201ENST00000423746 351 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 HMGN2P7-201ENST00000456186 273 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 RPL31P50-201ENST00000471002 296 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 FABP5P12-201ENST00000515543 389 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.24□□□□□ -1.73
CLTCL1P53675 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.24□□□□□ -1.73
CLTCL1P53675 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.24□□□□□ -1.73
CLTCL1P53675 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.24□□□□□ -1.73
CLTCL1P53675 AC104984.5-201ENST00000586878 94 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.24□□□□□ -1.73
CLTCL1P53675 AC007566.2-201ENST00000603642 413 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 AP003485.2-201ENST00000623636 610 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 AL359757.2-201ENST00000624309 274 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLTCL1P53675 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CLTCL1P53675 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CLTCL1P53675 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLTCL1P53675 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLTCL1P53675 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLTCL1P53675 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.24□□□□□ -1.73
CLTCL1P53675 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLTCL1P53675 NPM1P24-201ENST00000428039 894 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.24□□□□□ -1.73
CLTCL1P53675 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.24□□□□□ -1.73
CLTCL1P53675 RN7SKP272-201ENST00000516988 232 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 COX6CP8-201ENST00000522620 226 ntBASIC4.24□□□□□ -1.73
CLTCL1P53675 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLTCL1P53675 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLTCL1P53675 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.24□□□□□ -1.73
CLTCL1P53675 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
CLTCL1P53675 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLTCL1P53675 ELL2P4-201ENST00000446870 1376 ntBASIC4.23□□□□□ -1.73
CLTCL1P53675 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CLTCL1P53675 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLTCL1P53675 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.23□□□□□ -1.73
CLTCL1P53675 MTCO1P8-201ENST00000416914 1523 ntBASIC4.23□□□□□ -1.73
CLTCL1P53675 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLTCL1P53675 FTLP6-201ENST00000355274 422 ntBASIC4.23□□□□□ -1.73
CLTCL1P53675 RPL6P21-201ENST00000418672 846 ntBASIC4.23□□□□□ -1.73
CLTCL1P53675 HMGB3P8-201ENST00000449709 577 ntBASIC4.23□□□□□ -1.73
CLTCL1P53675 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLTCL1P53675 AC022960.2-201ENST00000616300 666 ntBASIC4.23□□□□□ -1.73
CLTCL1P53675 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.23□□□□□ -1.73
CLTCL1P53675 LINC01355-201ENST00000566551 5444 ntBASIC4.23□□□□□ -1.73
CLTCL1P53675 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms