Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL355578.1-201ENST00000607405 1328 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.76□□□□□ -1.81
CASQ1P31415 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CASQ1P31415 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CASQ1P31415 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CASQ1P31415 SNORD56.3-201ENST00000363507 71 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 RN7SKP280-201ENST00000364196 304 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 AL591034.1-201ENST00000407447 340 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 RNU4-65P-201ENST00000410473 140 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.76□□□□□ -1.81
CASQ1P31415 AL592293.2-201ENST00000422292 996 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.76□□□□□ -1.81
CASQ1P31415 AC140076.1-201ENST00000449897 361 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.76□□□□□ -1.81
CASQ1P31415 HMGB1P5-202ENST00000451497 985 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 NPM1P13-201ENST00000452663 865 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.76□□□□□ -1.81
CASQ1P31415 RN7SL594P-201ENST00000470590 287 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 AC108860.1-201ENST00000484521 383 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 HMGB1P22-201ENST00000505315 124 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.76□□□□□ -1.81
CASQ1P31415 RPL7L1P13-201ENST00000511702 739 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 AC016065.2-201ENST00000514530 444 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.76□□□□□ -1.81
CASQ1P31415 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.76□□□□□ -1.81
CASQ1P31415 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CASQ1P31415 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
CASQ1P31415 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.76□□□□□ -1.81
CASQ1P31415 AC053481.4-201ENST00000583164 216 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.76□□□□□ -1.81
CASQ1P31415 AC092354.2-201ENST00000607786 514 ntBASIC3.76□□□□□ -1.81
CASQ1P31415 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.76□□□□□ -1.81
CASQ1P31415 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.76□□□□□ -1.81
CASQ1P31415 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CASQ1P31415 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CASQ1P31415 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.76□□□□□ -1.81
CASQ1P31415 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CASQ1P31415 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CASQ1P31415 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CASQ1P31415 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CASQ1P31415 RPS3AP26-201ENST00000398259 784 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 RPL21P65-201ENST00000406094 466 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.75□□□□□ -1.81
CASQ1P31415 AL139128.1-201ENST00000413921 941 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.75□□□□□ -1.81
CASQ1P31415 MRPL50P2-201ENST00000416821 482 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.75□□□□□ -1.81
CASQ1P31415 AC245054.1-201ENST00000420944 258 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 RPS7P2-201ENST00000435134 607 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.75□□□□□ -1.81
CASQ1P31415 NUTF2P3-201ENST00000448540 384 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 RPL36AP33-201ENST00000450395 310 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 RPS24P6-201ENST00000452670 400 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 RPL23AP67-201ENST00000465341 474 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.75□□□□□ -1.81
CASQ1P31415 AC068724.1-201ENST00000487100 792 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.75□□□□□ -1.81
CASQ1P31415 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.75□□□□□ -1.81
CASQ1P31415 KCTD9P5-201ENST00000504141 1170 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AC008638.1-201ENST00000506035 866 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.75□□□□□ -1.81
CASQ1P31415 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.75□□□□□ -1.81
CASQ1P31415 RNA5SP385-201ENST00000515947 110 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 RN7SKP96-201ENST00000516948 297 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AC239860.2-201ENST00000525886 270 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.75□□□□□ -1.81
CASQ1P31415 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.75□□□□□ -1.81
CASQ1P31415 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.75□□□□□ -1.81
CASQ1P31415 AC007566.2-201ENST00000603642 413 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AL009028.1-201ENST00000604895 802 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AC068831.7-201ENST00000616954 363 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.75□□□□□ -1.81
CASQ1P31415 AC006963.1-201ENST00000624003 1052 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 AC090506.2-201ENST00000624521 419 ntBASIC3.75□□□□□ -1.81
CASQ1P31415 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.75□□□□□ -1.81
CASQ1P31415 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.75□□□□□ -1.81
CASQ1P31415 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.74□□□□□ -1.81
CASQ1P31415 API5P2-201ENST00000397055 1498 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CASQ1P31415 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CASQ1P31415 RNU6-629P-201ENST00000384061 103 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 RNU6-891P-201ENST00000384280 111 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 RN7SKP278-201ENST00000410504 342 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.74□□□□□ -1.81
CASQ1P31415 AL356968.1-201ENST00000416622 474 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 AL356095.1-201ENST00000417217 199 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.74□□□□□ -1.81
CASQ1P31415 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.74□□□□□ -1.81
CASQ1P31415 ISCA1P2-201ENST00000438679 421 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 RPS27P5-201ENST00000444247 244 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CASQ1P31415 HMGB1P15-201ENST00000453854 435 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 AC007967.1-201ENST00000455422 1159 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 snoU13.24-201ENST00000458998 104 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 AC108078.3-201ENST00000502633 489 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.74□□□□□ -1.81
CASQ1P31415 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.74□□□□□ -1.81
CASQ1P31415 AC008494.2-201ENST00000514544 370 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 RN7SKP282-201ENST00000516824 299 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms