Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN4P29074 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPN4P29074 AC104115.2-201ENST00000523026 687 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 OR4C2P-201ENST00000530855 1064 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 AC139103.1-201ENST00000534696 1030 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN4P29074 AC006270.2-201ENST00000578523 652 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPN4P29074 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.88□□□□□ -1.79
PTPN4P29074 BNIP3P19-201ENST00000605397 577 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 AC026741.1-201ENST00000605892 482 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 MIR7151-201ENST00000617477 60 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 RNU6-156P-201ENST00000621869 107 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 AC103798.2-201ENST00000624292 632 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 AC091905.1-201ENST00000624400 311 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN4P29074 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPN4P29074 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
PTPN4P29074 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
PTPN4P29074 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN4P29074 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PTPN4P29074 CEP170P1-201ENST00000502249 4587 ntBASIC3.88□□□□□ -1.79
PTPN4P29074 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPN4P29074 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN4P29074 SNORD35B-201ENST00000363660 87 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 RNA5SP189-201ENST00000364920 115 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.87□□□□□ -1.79
PTPN4P29074 RNU6-481P-201ENST00000384194 107 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN4P29074 AL391417.1-201ENST00000404100 426 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 AL355379.1-201ENST00000405542 640 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 RNU6ATAC-201ENST00000408749 126 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 RNU4-6P-201ENST00000410804 122 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 HSPE1P12-201ENST00000412576 301 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPN4P29074 OR4F13P-201ENST00000428478 931 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 AL358472.1-201ENST00000431295 329 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 AL158053.1-201ENST00000441503 453 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 HMGN2P21-201ENST00000447764 270 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 AC233982.1-201ENST00000451247 436 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 MRPL35P4-201ENST00000453682 566 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.87□□□□□ -1.79
PTPN4P29074 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.87□□□□□ -1.79
PTPN4P29074 RPL29P14-201ENST00000495837 428 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 RNU6-334P-201ENST00000517072 102 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPN4P29074 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPN4P29074 CYP2C60P-201ENST00000566088 139 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 BNIP3P22-201ENST00000593399 556 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 AC016542.1-201ENST00000608259 493 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 AP005229.2-201ENST00000609980 697 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 RNVU1-4-201ENST00000612985 164 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 AL391261.4-201ENST00000616012 481 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 U73479.1-201ENST00000618062 168 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 MIR6500-201ENST00000622700 86 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 AC124312.6-202ENST00000623624 418 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 OR8B1P-202ENST00000641132 1178 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 ZNF849P-201ENST00000594711 1566 ntBASIC3.87□□□□□ -1.79
PTPN4P29074 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PTPN4P29074 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN4P29074 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN4P29074 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN4P29074 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN4P29074 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN4P29074 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN4P29074 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN4P29074 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
PTPN4P29074 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN4P29074 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PTPN4P29074 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PTPN4P29074 SNORA60-201ENST00000362396 134 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PTPN4P29074 RNU6-468P-201ENST00000384003 109 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 PTMAP2-201ENST00000397627 327 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 TMSB4XP8-201ENST00000402089 135 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 HMGB3P19-201ENST00000403971 560 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AC069218.2-201ENST00000411665 344 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 TMSB4XP6-201ENST00000415187 135 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPN4P29074 PTP4A1P5-201ENST00000420305 455 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 TMSB4XP1-201ENST00000424567 135 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 MTCO2P1-201ENST00000424648 477 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 DEFB130D-201ENST00000426866 237 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN4P29074 AL138799.3-201ENST00000438968 350 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 HMGB1P37-201ENST00000439613 609 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN4P29074 AC006011.1-201ENST00000442758 349 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AL590399.6-201ENST00000446396 307 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN4P29074 DNAJC19P8-201ENST00000452887 259 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AC004801.2-202ENST00000463559 283 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 PPIAP15-201ENST00000479662 484 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AC005921.1-201ENST00000510589 286 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN4P29074 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPN4P29074 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN4P29074 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN4P29074 AGGF1P8-201ENST00000562979 1000 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms