Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC2.77□□□□□ -1.97
LAMA1P25391 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LAMA1P25391 AC027287.1-201ENST00000553115 1453 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LAMA1P25391 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LAMA1P25391 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LAMA1P25391 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
LAMA1P25391 OR2X1P-201ENST00000421144 687 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 AC007563.3-201ENST00000433233 371 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 IFNA11P-201ENST00000446352 526 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.77□□□□□ -1.97
LAMA1P25391 KLHL2P1-201ENST00000508691 521 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.77□□□□□ -1.97
LAMA1P25391 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LAMA1P25391 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LAMA1P25391 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LAMA1P25391 DDX18P3-201ENST00000404856 2007 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2.77□□□□□ -1.97
LAMA1P25391 KPNA2P2-201ENST00000419546 1489 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LAMA1P25391 FAM133CP-201ENST00000332869 704 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 ATF1P1-201ENST00000406040 927 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 OR51A3P-201ENST00000413596 924 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 AC087499.2-201ENST00000432861 149 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LAMA1P25391 AC104687.1-201ENST00000485829 412 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 AC009237.17-201ENST00000618111 748 ntBASIC2.77□□□□□ -1.97
LAMA1P25391 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.77□□□□□ -1.97
LAMA1P25391 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LAMA1P25391 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.76□□□□□ -1.97
LAMA1P25391 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LAMA1P25391 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LAMA1P25391 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LAMA1P25391 RNU6-859P-201ENST00000362728 107 ntBASIC2.76□□□□□ -1.97
LAMA1P25391 Y_RNA.226-201ENST00000364337 114 ntBASIC2.76□□□□□ -1.97
LAMA1P25391 AC110754.1-201ENST00000399740 601 ntBASIC2.76□□□□□ -1.97
LAMA1P25391 AL356057.3-201ENST00000402607 340 ntBASIC2.76□□□□□ -1.97
LAMA1P25391 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.76□□□□□ -1.97
LAMA1P25391 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.76□□□□□ -1.97
LAMA1P25391 MYL12AP1-201ENST00000518490 515 ntBASIC2.76□□□□□ -1.97
LAMA1P25391 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.76□□□□□ -1.97
LAMA1P25391 AC244205.2-202ENST00000635781 342 ntBASIC2.76□□□□□ -1.97
LAMA1P25391 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC2.76□□□□□ -1.97
LAMA1P25391 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
LAMA1P25391 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
LAMA1P25391 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LAMA1P25391 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LAMA1P25391 VN1R48P-201ENST00000448149 1036 ntBASIC2.76□□□□□ -1.97
LAMA1P25391 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.76□□□□□ -1.97
LAMA1P25391 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LAMA1P25391 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.76□□□□□ -1.97
LAMA1P25391 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.76□□□□□ -1.97
LAMA1P25391 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LAMA1P25391 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LAMA1P25391 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.75□□□□□ -1.97
LAMA1P25391 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LAMA1P25391 RNA5SP31-201ENST00000411144 127 ntBASIC2.75□□□□□ -1.97
LAMA1P25391 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.75□□□□□ -1.97
LAMA1P25391 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.75□□□□□ -1.97
LAMA1P25391 AC008280.2-201ENST00000455473 307 ntBASIC2.75□□□□□ -1.97
LAMA1P25391 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.75□□□□□ -1.97
LAMA1P25391 AC009163.5-201ENST00000575421 637 ntBASIC2.75□□□□□ -1.97
LAMA1P25391 MIR4727-201ENST00000622232 55 ntBASIC2.75□□□□□ -1.97
LAMA1P25391 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC2.75□□□□□ -1.97
LAMA1P25391 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LAMA1P25391 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.75□□□□□ -1.97
LAMA1P25391 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.75□□□□□ -1.97
LAMA1P25391 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.75□□□□□ -1.97
LAMA1P25391 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.75□□□□□ -1.97
LAMA1P25391 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.75□□□□□ -1.97
LAMA1P25391 AC107016.2-201ENST00000547968 190 ntBASIC2.75□□□□□ -1.97
LAMA1P25391 MIR4738-201ENST00000579134 87 ntBASIC2.75□□□□□ -1.97
LAMA1P25391 AC009948.4-201ENST00000604692 675 ntBASIC2.75□□□□□ -1.97
LAMA1P25391 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LAMA1P25391 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LAMA1P25391 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LAMA1P25391 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LAMA1P25391 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LAMA1P25391 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LAMA1P25391 MTCO1P39-201ENST00000426148 480 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 FAM103A2P-201ENST00000444122 354 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 RPL7L1P1-201ENST00000448259 785 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 snoU13.23-201ENST00000458863 104 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 RN7SKP31-201ENST00000516354 278 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 OR5G4P-201ENST00000525251 760 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.74□□□□□ -1.97
LAMA1P25391 ATP5F1P7-201ENST00000567330 760 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.74□□□□□ -1.97
LAMA1P25391 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.74□□□□□ -1.97
LAMA1P25391 RNU6-991P-201ENST00000516168 107 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.74□□□□□ -1.97
LAMA1P25391 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LAMA1P25391 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LAMA1P25391 AC118273.1-201ENST00000525324 3006 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 SEPT7P2-202ENST00000398921 823 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 AL138827.1-201ENST00000402666 306 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 RN7SKP223-201ENST00000410582 62 ntBASIC2.74□□□□□ -1.97
LAMA1P25391 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.74□□□□□ -1.97
LAMA1P25391 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.74□□□□□ -1.97
LAMA1P25391 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms