Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VAMP1P23763 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
VAMP1P23763 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.3□□□□□ -1.56
VAMP1P23763 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VAMP1P23763 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 DEFB108F-201ENST00000344638 222 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 RNA5SP114-201ENST00000363780 113 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 RNU6-61P-201ENST00000365528 109 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 SMIM11P1-201ENST00000369586 178 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 HSPE1P8-201ENST00000406997 288 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 RN7SKP86-201ENST00000410454 332 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AL929472.1-201ENST00000417484 429 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VAMP1P23763 AL672212.1-201ENST00000422246 400 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP1P23763 SNRPEP8-201ENST00000442866 260 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 GAPDHP20-201ENST00000444107 1007 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 AC092451.1-201ENST00000480211 153 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 RPL34P29-201ENST00000491411 325 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 MTCYBP18-201ENST00000501056 747 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.3□□□□□ -1.56
VAMP1P23763 RN7SKP219-201ENST00000516825 296 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 SNORA31.22-201ENST00000517204 135 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 SUB1P1-201ENST00000524415 382 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VAMP1P23763 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP1P23763 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP1P23763 AC106782.4-201ENST00000568264 210 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.3□□□□□ -1.56
VAMP1P23763 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.3□□□□□ -1.56
VAMP1P23763 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP1P23763 AC002545.1-201ENST00000592511 181 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP1P23763 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AC243830.3-201ENST00000616810 376 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 MIR6732-201ENST00000619365 60 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AC010338.1-201ENST00000621823 717 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AC011155.2-201ENST00000623202 216 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP1P23763 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 AC000095.2-202ENST00000637415 154 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 AL031595.2-201ENST00000624215 19071 ntBASIC5.3□□□□□ -1.56
VAMP1P23763 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
VAMP1P23763 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.3□□□□□ -1.56
VAMP1P23763 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP1P23763 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.29□□□□□ -1.56
VAMP1P23763 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP1P23763 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP1P23763 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP1P23763 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP1P23763 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.29□□□□□ -1.56
VAMP1P23763 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VAMP1P23763 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
VAMP1P23763 SNORA51.2-201ENST00000364595 132 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 SNORD115-7-201ENST00000365306 82 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 Y_RNA.576-201ENST00000384781 102 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VAMP1P23763 RPL30P2-201ENST00000414021 291 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 OR6E1P-201ENST00000414424 923 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 AL359092.1-201ENST00000417156 265 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.29□□□□□ -1.56
VAMP1P23763 TOMM22P1-201ENST00000418578 312 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.29□□□□□ -1.56
VAMP1P23763 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.29□□□□□ -1.56
VAMP1P23763 AC018630.2-202ENST00000422992 927 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.29□□□□□ -1.56
VAMP1P23763 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.29□□□□□ -1.56
VAMP1P23763 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.29□□□□□ -1.56
VAMP1P23763 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP1P23763 AC093019.1-201ENST00000443135 252 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.29□□□□□ -1.56
VAMP1P23763 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.29□□□□□ -1.56
VAMP1P23763 GAPDHP27-201ENST00000447427 1020 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.29□□□□□ -1.56
VAMP1P23763 RPS24P6-201ENST00000452670 400 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 RPS27AP3-201ENST00000453803 454 ntBASIC5.29□□□□□ -1.56
VAMP1P23763 RN7SL492P-201ENST00000460700 295 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms