Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL671309.1-201ENST00000603750 544 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 AC120053.1-201ENST00000607706 736 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 AC074140.1-201ENST00000621617 208 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 AC090772.4-201ENST00000623599 362 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL5A2P05997 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL5A2P05997 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL5A2P05997 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL5A2P05997 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.3□□□□□ -1.72
COL5A2P05997 MTCO1P24-201ENST00000515438 1558 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL5A2P05997 HMGN2P8-201ENST00000391458 268 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.3□□□□□ -1.72
COL5A2P05997 ATP5F1P6-201ENST00000402768 767 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 RNU2-22P-201ENST00000411266 212 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 AC069282.1-201ENST00000411911 526 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 AC092473.1-201ENST00000441098 221 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.3□□□□□ -1.72
COL5A2P05997 RNU6-760P-201ENST00000516078 97 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL5A2P05997 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.3□□□□□ -1.72
COL5A2P05997 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.3□□□□□ -1.72
COL5A2P05997 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.3□□□□□ -1.72
COL5A2P05997 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.3□□□□□ -1.72
COL5A2P05997 AC013412.1-201ENST00000610687 192 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 AC091046.2-201ENST00000620775 665 ntBASIC4.3□□□□□ -1.72
COL5A2P05997 AC233263.6-201ENST00000631132 1963 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
COL5A2P05997 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL5A2P05997 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL5A2P05997 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
COL5A2P05997 SNORA63.3-201ENST00000362682 132 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 RNA5SP235-201ENST00000365411 114 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.29□□□□□ -1.72
COL5A2P05997 ARF4P3-201ENST00000397387 509 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.29□□□□□ -1.72
COL5A2P05997 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.29□□□□□ -1.72
COL5A2P05997 AC004552.1-201ENST00000419089 348 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 SETP5-201ENST00000437270 562 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 AL357552.1-201ENST00000445254 415 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 AC005229.2-201ENST00000456995 399 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL5A2P05997 RPL23AP73-201ENST00000492507 471 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.29□□□□□ -1.72
COL5A2P05997 AC034244.2-201ENST00000514668 858 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.29□□□□□ -1.72
COL5A2P05997 AC011270.1-201ENST00000558606 583 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 AF129408.1-201ENST00000608767 431 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 AP003485.1-201ENST00000625093 753 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 AL356118.1-201ENST00000635272 1078 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 AC132825.8-201ENST00000640783 297 ntBASIC4.29□□□□□ -1.72
COL5A2P05997 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A2P05997 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A2P05997 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL5A2P05997 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.28□□□□□ -1.72
COL5A2P05997 MIR449A-201ENST00000362113 91 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 Z80107.1-201ENST00000436830 412 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.28□□□□□ -1.72
COL5A2P05997 AC000041.1-201ENST00000439655 175 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 AC008264.1-201ENST00000447612 367 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 HMGN1P5-201ENST00000448591 263 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 MTND5P8-201ENST00000449817 1083 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 DNAJC19P1-201ENST00000455312 319 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 RPL31P53-201ENST00000457065 348 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.28□□□□□ -1.72
COL5A2P05997 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.28□□□□□ -1.72
COL5A2P05997 AC015911.5-201ENST00000587076 451 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 AL390838.2-201ENST00000602394 274 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.28□□□□□ -1.72
COL5A2P05997 AL445493.3-201ENST00000619568 477 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 AL445984.1-201ENST00000637834 659 ntBASIC4.28□□□□□ -1.72
COL5A2P05997 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.28□□□□□ -1.72
COL5A2P05997 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A2P05997 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
COL5A2P05997 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.27□□□□□ -1.73
COL5A2P05997 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
COL5A2P05997 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
COL5A2P05997 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A2P05997 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A2P05997 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A2P05997 MTND4LP14-201ENST00000429447 288 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.27□□□□□ -1.73
COL5A2P05997 MTND2P2-201ENST00000434633 945 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 MRPS33P4-201ENST00000434892 317 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.27□□□□□ -1.73
COL5A2P05997 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.27□□□□□ -1.73
COL5A2P05997 RPS3AP50-201ENST00000487064 803 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 OR2A20P-203ENST00000498397 1268 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 VN1R104P-201ENST00000505115 1009 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.27□□□□□ -1.73
COL5A2P05997 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.27□□□□□ -1.73
COL5A2P05997 AC026801.2-201ENST00000515352 425 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.27□□□□□ -1.73
COL5A2P05997 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.27□□□□□ -1.73
COL5A2P05997 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.27□□□□□ -1.73
COL5A2P05997 AC079148.1-201ENST00000565944 819 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.27□□□□□ -1.73
COL5A2P05997 AL450270.1-201ENST00000606160 391 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 LINC00216-201ENST00000623548 1126 ntBASIC4.27□□□□□ -1.73
COL5A2P05997 AL596275.2-204ENST00000641628 552 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms