Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.8□□□□□ -1.48
PDGFAP04085 AC016696.1-201ENST00000446949 318 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 RNU7-152P-201ENST00000458982 64 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFAP04085 RN7SL714P-201ENST00000487050 298 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 RN7SL561P-201ENST00000488553 281 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 AL049874.2-201ENST00000492636 288 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 Y_RNA.654-201ENST00000497848 106 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFAP04085 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFAP04085 AC139365.2-201ENST00000517972 253 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 MYL12AP1-201ENST00000518490 515 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFAP04085 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFAP04085 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFAP04085 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFAP04085 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFAP04085 AL133153.1-201ENST00000557756 303 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 AC005341.1-201ENST00000571086 708 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFAP04085 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFAP04085 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFAP04085 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFAP04085 AC136443.5-201ENST00000603741 370 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 AC245389.1-201ENST00000605141 529 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFAP04085 AP001486.3-201ENST00000615334 372 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PDGFAP04085 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 AC074141.1-201ENST00000588129 2995 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFAP04085 MTND5P16-201ENST00000460269 1703 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFAP04085 CASC19-228ENST00000641414 1684 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFAP04085 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFAP04085 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFAP04085 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFAP04085 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFAP04085 RNU1-59P-201ENST00000364829 162 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 Y_RNA.339-201ENST00000365325 102 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 RNU6-639P-201ENST00000384074 107 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 Y_RNA.459-201ENST00000384251 102 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDGFAP04085 MTCYBP4-201ENST00000401524 249 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AL592114.1-201ENST00000403842 483 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 RN7SKP121-201ENST00000410842 305 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AC074085.1-201ENST00000413598 418 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFAP04085 RPS15AP40-201ENST00000419621 391 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 REREP1Y-201ENST00000422655 198 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFAP04085 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.79□□□□□ -1.48
PDGFAP04085 REREP2Y-201ENST00000439103 200 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 RPL21P133-201ENST00000443666 476 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.79□□□□□ -1.48
PDGFAP04085 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFAP04085 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFAP04085 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFAP04085 RPL36AP13-201ENST00000457490 317 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AL162395.1-201ENST00000457882 422 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 snoU13.29-201ENST00000459370 104 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 RNU7-66P-201ENST00000459469 62 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 RPL35AP28-201ENST00000459730 331 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 FAM60DP-201ENST00000524174 632 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AP000889.2-201ENST00000532684 490 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AL133271.1-201ENST00000538229 291 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AC090022.1-201ENST00000546569 311 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFAP04085 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFAP04085 AL163153.1-201ENST00000554223 283 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFAP04085 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFAP04085 AC106900.2-201ENST00000604994 317 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 CTHRC1P1-201ENST00000605383 469 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AC124303.1-201ENST00000605703 360 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AL390240.1-201ENST00000612950 384 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 OR1N1-202ENST00000619659 939 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AL359757.2-201ENST00000624309 274 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PDGFAP04085 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 AC009120.2-204ENST00000621548 2032 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PDGFAP04085 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFAP04085 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.79□□□□□ -1.48
PDGFAP04085 AC008758.3-201ENST00000507003 1829 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms